Analysis of interatomic Contacts of Structural Units in PDB entry:
7OUF

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7OUF entry

There are 10 chains in PDB entry 7OUF (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
D	SER 3	ARG 280
E	SER 3	ARG 280
F	LEU 27	LYS 333
I	A 1	C 21
J	G 2	A 20
A	SER 3	ARG 280
B	SER 3	ARG 280
C	LEU 27	LYS 333
K	A 1	C 21
H	G 2	A 20

There are 74 helices in PDB entry 7OUF. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	D	3	12	Right-handed alpha
Helix 2	AA2	D	14	20	Right-handed alpha
Helix 3	AA3	D	24	34	Right-handed alpha
Helix 4	AA4	D	98	114	Right-handed alpha
Helix 5	AA5	D	129	140	Right-handed alpha
Helix 6	AA6	D	158	175	Right-handed alpha
Helix 7	AA7	D	181	194	Right-handed alpha
Helix 8	AA8	D	203	210	Right-handed alpha
Helix 9	AA9	E	4	12	Right-handed alpha
Helix 10	AB1	E	14	21	Right-handed alpha
Helix 11	AB2	E	24	35	Right-handed alpha
Helix 12	AB3	E	35	41	Right-handed alpha
Helix 13	AB4	E	98	114	Right-handed alpha
Helix 14	AB5	E	129	139	Right-handed alpha
Helix 15	AB6	E	150	153	Right-handed 310
Helix 16	AB7	E	154	175	Right-handed alpha
Helix 17	AB8	E	179	194	Right-handed alpha
Helix 18	AB9	E	203	209	Right-handed alpha
Helix 19	AC1	F	29	33	Right-handed 310
Helix 20	AC2	F	37	49	Right-handed alpha
Helix 21	AC3	F	62	81	Right-handed alpha
Helix 22	AC4	F	88	90	Right-handed 310
Helix 23	AC5	F	91	103	Right-handed alpha
Helix 24	AC6	F	130	146	Right-handed alpha
Helix 25	AC7	F	160	169	Right-handed alpha
Helix 26	AC8	F	170	173	Right-handed 310
Helix 27	AC9	F	175	193	Right-handed alpha
Helix 28	AD1	F	197	213	Right-handed alpha
Helix 29	AD2	F	220	233	Right-handed alpha
Helix 30	AD3	F	240	250	Right-handed alpha
Helix 31	AD4	F	252	257	Right-handed 310
Helix 32	AD5	F	260	262	Right-handed 310
Helix 33	AD6	F	263	276	Right-handed alpha
Helix 34	AD7	F	281	292	Right-handed alpha
Helix 35	AD8	F	300	316	Right-handed alpha
Helix 36	AD9	F	317	320	Right-handed 310
Helix 37	AE1	F	323	333	Right-handed alpha
Helix 38	AE2	A	4	12	Right-handed alpha
Helix 39	AE3	A	14	20	Right-handed alpha
Helix 40	AE4	A	24	34	Right-handed alpha
Helix 41	AE5	A	98	114	Right-handed alpha
Helix 42	AE6	A	129	140	Right-handed alpha
Helix 43	AE7	A	158	175	Right-handed alpha
Helix 44	AE8	A	181	194	Right-handed alpha
Helix 45	AE9	A	203	210	Right-handed alpha
Helix 46	AF1	B	4	12	Right-handed alpha
Helix 47	AF2	B	14	21	Right-handed alpha
Helix 48	AF3	B	24	35	Right-handed alpha
Helix 49	AF4	B	35	41	Right-handed alpha
Helix 50	AF5	B	98	114	Right-handed alpha
Helix 51	AF6	B	129	139	Right-handed alpha
Helix 52	AF7	B	150	153	Right-handed 310
Helix 53	AF8	B	154	175	Right-handed alpha
Helix 54	AF9	B	179	194	Right-handed alpha
Helix 55	AG1	B	203	209	Right-handed alpha
Helix 56	AG2	C	29	33	Right-handed 310
Helix 57	AG3	C	37	49	Right-handed alpha
Helix 58	AG4	C	62	81	Right-handed alpha
Helix 59	AG5	C	88	90	Right-handed 310
Helix 60	AG6	C	91	103	Right-handed alpha
Helix 61	AG7	C	130	146	Right-handed alpha
Helix 62	AG8	C	160	169	Right-handed alpha
Helix 63	AG9	C	170	173	Right-handed 310
Helix 64	AH1	C	175	193	Right-handed alpha
Helix 65	AH2	C	197	213	Right-handed alpha
Helix 66	AH3	C	220	233	Right-handed alpha
Helix 67	AH4	C	240	250	Right-handed alpha
Helix 68	AH5	C	252	257	Right-handed 310
Helix 69	AH6	C	260	262	Right-handed 310
Helix 70	AH7	C	263	276	Right-handed alpha
Helix 71	AH8	C	281	292	Right-handed alpha
Helix 72	AH9	C	300	316	Right-handed alpha
Helix 73	AI1	C	317	320	Right-handed 310
Helix 74	AI2	C	323	333	Right-handed alpha

There are 12 sheets in PDB entry 7OUF. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	89	94	first strand
Strand 2	D	75	83	anti-parallel
Strand 3	D	61	70	anti-parallel
Strand 4	D	118	122	parallel
Strand 5	D	142	146	parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	245	247	first strand
Strand 2	D	229	232	anti-parallel
Strand 3	D	273	275	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	251	252	first strand
Strand 2	D	255	258	anti-parallel
Strand 3	D	266	269	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	89	94	first strand
Strand 2	E	74	83	anti-parallel
Strand 3	E	61	71	anti-parallel
Strand 4	E	118	121	parallel
Strand 5	E	142	145	parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	243	247	first strand
Strand 2	E	229	232	anti-parallel
Strand 3	E	273	275	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	250	251	first strand
Strand 2	E	255	258	anti-parallel
Strand 3	E	266	269	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	89	94	first strand
Strand 2	A	75	83	anti-parallel
Strand 3	A	61	70	anti-parallel
Strand 4	A	118	122	parallel
Strand 5	A	142	146	parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	245	247	first strand
Strand 2	A	229	232	anti-parallel
Strand 3	A	273	275	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	251	252	first strand
Strand 2	A	255	258	anti-parallel
Strand 3	A	266	269	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	89	94	first strand
Strand 2	B	74	83	anti-parallel
Strand 3	B	61	71	anti-parallel
Strand 4	B	118	121	parallel
Strand 5	B	142	145	parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	243	247	first strand
Strand 2	B	229	232	anti-parallel
Strand 3	B	273	275	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	250	251	first strand
Strand 2	B	255	258	anti-parallel
Strand 3	B	266	269	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7OUF

Analysis of interatomic Contacts of Structural Units in PDB entry:
7OUF