Analysis of interatomic Contacts of Structural Units in PDB entry:
7OUR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7OUR entry

There are 6 chains in PDB entry 7OUR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 9LEU 126
C
 GLY 8LEU 126
D
 VAL 9LEU 126
F
 GLY 8GLY 128
B
 GLY 8LYS 127
E
 ALA 11LYS 127
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 6 helices in PDB entry 7OUR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
104 108Right-handed 310
Helix 2
AA2
C
104 108Right-handed 310
Helix 3
AA3
D
104 108Right-handed 310
Helix 4
AA4
F
104 108Right-handed 310
Helix 5
AA5
B
104 108Right-handed 310
Helix 6
AA6
E
104 108Right-handed 310
Back to top of page

There are 6 sheets in PDB entry 7OUR. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
121 122first strand
Strand 2
A
74 87parallel
Strand 3
A
90 99anti-parallel
Strand 4
A
109 117anti-parallel
Strand 5
A
13 17anti-parallel
Strand 6
A
22 28anti-parallel
Strand 7
A
33 39anti-parallel
Strand 8
A
52 59anti-parallel
Strand 9
A
62 70anti-parallel
Strand 10
A
74 87anti-parallel
Back to list of sheets
Back to top of page

There are 10 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
121 122first strand
Strand 2
F
74 87parallel
Strand 3
F
90 99anti-parallel
Strand 4
F
109 118anti-parallel
Strand 5
F
14 17anti-parallel
Strand 6
F
22 28anti-parallel
Strand 7
F
33 39anti-parallel
Strand 8
F
52 59anti-parallel
Strand 9
F
62 70anti-parallel
Strand 10
F
74 87anti-parallel
Back to list of sheets
Back to top of page

There are 10 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
121 122first strand
Strand 2
C
74 87parallel
Strand 3
C
90 99anti-parallel
Strand 4
C
109 118anti-parallel
Strand 5
C
13 17anti-parallel
Strand 6
C
22 28anti-parallel
Strand 7
C
33 39anti-parallel
Strand 8
C
51 59anti-parallel
Strand 9
C
62 70anti-parallel
Strand 10
C
74 87anti-parallel
Back to list of sheets
Back to top of page

There are 10 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
121 122first strand
Strand 2
B
74 87parallel
Strand 3
B
90 99anti-parallel
Strand 4
B
109 117anti-parallel
Strand 5
B
13 16anti-parallel
Strand 6
B
22 28anti-parallel
Strand 7
B
33 39anti-parallel
Strand 8
B
51 59anti-parallel
Strand 9
B
62 70anti-parallel
Strand 10
B
74 87anti-parallel
Back to list of sheets
Back to top of page

There are 10 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
121 122first strand
Strand 2
D
74 86parallel
Strand 3
D
91 99anti-parallel
Strand 4
D
109 118anti-parallel
Strand 5
D
13 17anti-parallel
Strand 6
D
22 28anti-parallel
Strand 7
D
33 39anti-parallel
Strand 8
D
51 59anti-parallel
Strand 9
D
62 70anti-parallel
Strand 10
D
74 86anti-parallel
Back to list of sheets
Back to top of page

There are 10 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
121 122first strand
Strand 2
E
74 87parallel
Strand 3
E
90 99anti-parallel
Strand 4
E
109 117anti-parallel
Strand 5
E
13 17anti-parallel
Strand 6
E
22 28anti-parallel
Strand 7
E
33 39anti-parallel
Strand 8
E
51 59anti-parallel
Strand 9
E
62 70anti-parallel
Strand 10
E
74 87anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il