Analysis of interatomic Contacts of Structural Units in PDB entry:
7OVP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7OVP entry

There are 2 chains in PDB entry 7OVP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 2MSE 341
B
 PRO 2MSE 341
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 7OVP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
65 69Right-handed 310
Helix 2
AA2
A
103 120Right-handed alpha
Helix 3
AA3
A
217 231Right-handed alpha
Helix 4
AA4
A
232 236Right-handed 310
Helix 5
AA5
A
237 242Right-handed alpha
Helix 6
AA6
A
246 267Right-handed alpha
Helix 7
AA7
A
268 281Right-handed alpha
Helix 8
AA8
A
283 292Right-handed alpha
Helix 9
AA9
A
294 308Right-handed alpha
Helix 10
AB1
A
323 336Right-handed alpha
Helix 11
AB2
B
65 69Right-handed 310
Helix 12
AB3
B
104 120Right-handed alpha
Helix 13
AB4
B
217 232Right-handed alpha
Helix 14
AB5
B
233 237Right-handed 310
Helix 15
AB6
B
239 243Right-handed 310
Helix 16
AB7
B
246 267Right-handed alpha
Helix 17
AB8
B
268 281Right-handed alpha
Helix 18
AB9
B
283 291Right-handed alpha
Helix 19
AC1
B
294 308Right-handed alpha
Helix 20
AC2
B
323 336Right-handed alpha
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There are 7 sheets in PDB entry 7OVP. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
45 53first strand
Strand 2
A
35 42anti-parallel
Strand 3
A
23 31anti-parallel
Strand 4
A
4 12anti-parallel
Strand 5
A
87 94anti-parallel
Strand 6
A
76 83anti-parallel
Strand 7
A
57 60anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
135 136first strand
Strand 2
A
123 132anti-parallel
Strand 3
A
142 152anti-parallel
Strand 4
A
161 168anti-parallel
Strand 5
A
171 174anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
135 136first strand
Strand 2
A
123 132anti-parallel
Strand 3
A
208 214anti-parallel
Strand 4
A
194 203anti-parallel
Strand 5
A
182 188anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
311 322first strand
Strand 2
B
311 322anti-parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
45 53first strand
Strand 2
B
35 42anti-parallel
Strand 3
B
24 31anti-parallel
Strand 4
B
4 14anti-parallel
Strand 5
B
87 94anti-parallel
Strand 6
B
77 83anti-parallel
Strand 7
B
57 62anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
135 136first strand
Strand 2
B
123 132anti-parallel
Strand 3
B
142 152anti-parallel
Strand 4
B
161 168anti-parallel
Strand 5
B
171 174anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
135 136first strand
Strand 2
B
123 132anti-parallel
Strand 3
B
209 214anti-parallel
Strand 4
B
198 202anti-parallel
Strand 5
B
180 184anti-parallel
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