Analysis of interatomic Contacts of Structural Units in PDB entry:
7OX1

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7OX1 entry

There are 12 chains in PDB entry 7OX1 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 1	CYS 230
B	ALA 2	VAL 209
C	GLN 1	CYS 230
D	ALA 2	THR 212
E	GLN 1	SER 229
F	ALA 2	VAL 205
G	GLN 19	MET 140
H	GLN 1	SER 229
L	ALA 2	PRO 211
X	GLN 19	ILE 144
Y	GLY 20	MET 140
Z	GLY 20	LYS 143

There are 57 helices in PDB entry 7OX1. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	62	67	Right-handed alpha
Helix 2	AA2	A	88	92	Right-handed 310
Helix 3	AA3	A	108	112	Right-handed 310
Helix 4	AA4	A	199	203	Right-handed 310
Helix 5	AA5	B	30	34	Right-handed 310
Helix 6	AA6	B	81	85	Right-handed 310
Helix 7	AA7	B	124	129	Right-handed alpha
Helix 8	AA8	B	184	191	Right-handed alpha
Helix 9	AA9	C	62	67	Right-handed alpha
Helix 10	AB1	C	88	92	Right-handed 310
Helix 11	AB2	C	108	112	Right-handed 310
Helix 12	AB3	C	201	204	Right-handed 310
Helix 13	AB4	D	30	34	Right-handed 310
Helix 14	AB5	D	81	85	Right-handed 310
Helix 15	AB6	D	124	129	Right-handed alpha
Helix 16	AB7	D	184	191	Right-handed alpha
Helix 17	AB8	E	63	66	Right-handed 310
Helix 18	AB9	E	88	92	Right-handed 310
Helix 19	AC1	E	108	112	Right-handed 310
Helix 20	AC2	E	170	172	Right-handed 310
Helix 21	AC3	E	199	203	Right-handed 310
Helix 22	AC4	F	30	34	Right-handed 310
Helix 23	AC5	F	81	85	Right-handed 310
Helix 24	AC6	F	124	129	Right-handed alpha
Helix 25	AC7	F	186	191	Right-handed alpha
Helix 26	AC8	G	23	39	Right-handed alpha
Helix 27	AC9	G	40	45	Right-handed 310
Helix 28	AD1	G	68	75	Right-handed alpha
Helix 29	AD2	G	79	85	Right-handed alpha
Helix 30	AD3	G	85	102	Right-handed alpha
Helix 31	AD4	G	120	140	Right-handed alpha
Helix 32	AD5	H	62	67	Right-handed alpha
Helix 33	AD6	H	88	92	Right-handed 310
Helix 34	AD7	H	108	112	Right-handed 310
Helix 35	AD8	H	201	203	Right-handed 310
Helix 36	AD9	H	215	218	Right-handed 310
Helix 37	AE1	L	30	34	Right-handed 310
Helix 38	AE2	L	81	85	Right-handed 310
Helix 39	AE3	L	124	129	Right-handed alpha
Helix 40	AE4	L	184	191	Right-handed alpha
Helix 41	AE5	X	23	39	Right-handed alpha
Helix 42	AE6	X	40	45	Right-handed 310
Helix 43	AE7	X	68	73	Right-handed alpha
Helix 44	AE8	X	79	85	Right-handed alpha
Helix 45	AE9	X	85	102	Right-handed alpha
Helix 46	AF1	X	120	142	Right-handed alpha
Helix 47	AF2	Y	23	39	Right-handed alpha
Helix 48	AF3	Y	68	74	Right-handed alpha
Helix 49	AF4	Y	79	85	Right-handed alpha
Helix 50	AF5	Y	85	102	Right-handed alpha
Helix 51	AF6	Y	120	140	Right-handed alpha
Helix 52	AF7	Z	23	39	Right-handed alpha
Helix 53	AF8	Z	68	73	Right-handed alpha
Helix 54	AF9	Z	79	85	Right-handed alpha
Helix 55	AG1	Z	85	102	Right-handed alpha
Helix 56	AG2	Z	104	108	Right-handed 310
Helix 57	AG3	Z	120	142	Right-handed alpha

There are 49 sheets in PDB entry 7OX1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	3	7	first strand
Strand 2	A	18	25	anti-parallel
Strand 3	A	79	84	anti-parallel
Strand 4	A	69	74	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	11	12	first strand
Strand 2	A	121	125	parallel
Strand 3	A	93	100	anti-parallel
Strand 4	A	35	41	anti-parallel
Strand 5	A	48	53	anti-parallel
Strand 6	A	59	61	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	11	12	first strand
Strand 2	A	121	125	parallel
Strand 3	A	93	100	anti-parallel
Strand 4	A	114	117	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	134	138	first strand
Strand 2	A	150	159	anti-parallel
Strand 3	A	190	198	anti-parallel
Strand 4	A	177	179	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	134	138	first strand
Strand 2	A	150	159	anti-parallel
Strand 3	A	190	198	anti-parallel
Strand 4	A	183	184	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	165	168	first strand
Strand 2	A	209	214	anti-parallel
Strand 3	A	219	224	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	4	6	first strand
Strand 2	B	18	24	anti-parallel
Strand 3	B	72	77	anti-parallel
Strand 4	B	64	69	anti-parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	9	12	first strand
Strand 2	B	104	108	parallel
Strand 3	B	86	94	anti-parallel
Strand 4	B	36	40	anti-parallel
Strand 5	B	47	51	anti-parallel
Strand 6	B	55	56	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	9	12	first strand
Strand 2	B	104	108	parallel
Strand 3	B	86	94	anti-parallel
Strand 4	B	97	100	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	117	121	first strand
Strand 2	B	133	142	anti-parallel
Strand 3	B	175	183	anti-parallel
Strand 4	B	162	164	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	117	121	first strand
Strand 2	B	133	142	anti-parallel
Strand 3	B	175	183	anti-parallel
Strand 4	B	168	169	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	148	150	first strand
Strand 2	B	197	200	anti-parallel
Strand 3	B	203	206	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	3	7	first strand
Strand 2	C	18	25	anti-parallel
Strand 3	C	79	84	anti-parallel
Strand 4	C	69	74	anti-parallel

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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	11	12	first strand
Strand 2	C	121	125	parallel
Strand 3	C	93	100	anti-parallel
Strand 4	C	35	41	anti-parallel
Strand 5	C	48	53	anti-parallel
Strand 6	C	59	61	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	11	12	first strand
Strand 2	C	121	125	parallel
Strand 3	C	93	100	anti-parallel
Strand 4	C	114	117	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	134	138	first strand
Strand 2	C	149	159	anti-parallel
Strand 3	C	190	199	anti-parallel
Strand 4	C	177	179	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	134	138	first strand
Strand 2	C	149	159	anti-parallel
Strand 3	C	190	199	anti-parallel
Strand 4	C	183	184	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	165	168	first strand
Strand 2	C	209	214	anti-parallel
Strand 3	C	219	224	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	4	6	first strand
Strand 2	D	18	24	anti-parallel
Strand 3	D	72	77	anti-parallel
Strand 4	D	64	69	anti-parallel

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There are 6 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	9	12	first strand
Strand 2	D	104	108	parallel
Strand 3	D	86	94	anti-parallel
Strand 4	D	36	40	anti-parallel
Strand 5	D	47	51	anti-parallel
Strand 6	D	55	56	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	9	12	first strand
Strand 2	D	104	108	parallel
Strand 3	D	86	94	anti-parallel
Strand 4	D	97	100	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	117	121	first strand
Strand 2	D	133	142	anti-parallel
Strand 3	D	175	183	anti-parallel
Strand 4	D	162	164	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	117	121	first strand
Strand 2	D	133	142	anti-parallel
Strand 3	D	175	183	anti-parallel
Strand 4	D	168	169	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	156	157	first strand
Strand 2	D	148	153	anti-parallel
Strand 3	D	194	200	anti-parallel
Strand 4	D	203	209	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	3	7	first strand
Strand 2	E	18	25	anti-parallel
Strand 3	E	79	84	anti-parallel
Strand 4	E	69	74	anti-parallel

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There are 6 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	11	12	first strand
Strand 2	E	121	125	parallel
Strand 3	E	93	100	anti-parallel
Strand 4	E	35	41	anti-parallel
Strand 5	E	48	53	anti-parallel
Strand 6	E	59	61	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	11	12	first strand
Strand 2	E	121	125	parallel
Strand 3	E	93	100	anti-parallel
Strand 4	E	114	117	anti-parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	134	138	first strand
Strand 2	E	150	159	anti-parallel
Strand 3	E	190	198	anti-parallel
Strand 4	E	177	179	anti-parallel

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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	134	138	first strand
Strand 2	E	150	159	anti-parallel
Strand 3	E	190	198	anti-parallel
Strand 4	E	183	184	anti-parallel

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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	165	168	first strand
Strand 2	E	209	214	anti-parallel
Strand 3	E	219	224	anti-parallel

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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	4	6	first strand
Strand 2	F	18	24	anti-parallel
Strand 3	F	72	77	anti-parallel
Strand 4	F	64	69	anti-parallel

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There are 6 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	9	12	first strand
Strand 2	F	104	108	parallel
Strand 3	F	86	94	anti-parallel
Strand 4	F	36	40	anti-parallel
Strand 5	F	47	51	anti-parallel
Strand 6	F	55	56	anti-parallel

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There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	9	12	first strand
Strand 2	F	104	108	parallel
Strand 3	F	86	94	anti-parallel
Strand 4	F	97	100	anti-parallel

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There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	117	121	first strand
Strand 2	F	136	142	anti-parallel
Strand 3	F	175	179	anti-parallel
Strand 4	F	168	169	anti-parallel

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There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	148	149	first strand
Strand 2	F	198	200	anti-parallel
Strand 3	F	203	205	anti-parallel

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There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	3	7	first strand
Strand 2	H	18	25	anti-parallel
Strand 3	H	79	84	anti-parallel
Strand 4	H	69	74	anti-parallel

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There are 6 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	11	12	first strand
Strand 2	H	121	125	parallel
Strand 3	H	93	100	anti-parallel
Strand 4	H	35	41	anti-parallel
Strand 5	H	48	53	anti-parallel
Strand 6	H	59	61	anti-parallel

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There are 4 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	11	12	first strand
Strand 2	H	121	125	parallel
Strand 3	H	93	100	anti-parallel
Strand 4	H	114	117	anti-parallel

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There are 4 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	134	138	first strand
Strand 2	H	149	159	anti-parallel
Strand 3	H	190	199	anti-parallel
Strand 4	H	177	179	anti-parallel

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There are 4 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	134	138	first strand
Strand 2	H	149	159	anti-parallel
Strand 3	H	190	199	anti-parallel
Strand 4	H	183	184	anti-parallel

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There are 3 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	165	168	first strand
Strand 2	H	208	214	anti-parallel
Strand 3	H	219	225	anti-parallel

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There are 4 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	4	6	first strand
Strand 2	L	18	24	anti-parallel
Strand 3	L	72	77	anti-parallel
Strand 4	L	64	69	anti-parallel

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There are 6 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	9	12	first strand
Strand 2	L	104	108	parallel
Strand 3	L	86	94	anti-parallel
Strand 4	L	36	40	anti-parallel
Strand 5	L	47	51	anti-parallel
Strand 6	L	55	56	anti-parallel

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There are 4 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	9	12	first strand
Strand 2	L	104	108	parallel
Strand 3	L	86	94	anti-parallel
Strand 4	L	97	100	anti-parallel

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There are 4 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	117	121	first strand
Strand 2	L	133	142	anti-parallel
Strand 3	L	175	183	anti-parallel
Strand 4	L	162	164	anti-parallel

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There are 4 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	117	121	first strand
Strand 2	L	133	142	anti-parallel
Strand 3	L	175	183	anti-parallel
Strand 4	L	168	169	anti-parallel

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There are 4 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	156	157	first strand
Strand 2	L	148	153	anti-parallel
Strand 3	L	194	200	anti-parallel
Strand 4	L	203	209	anti-parallel

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There are 2 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Y	57	60	first strand
Strand 2	Y	116	119	anti-parallel

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There are 2 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Z	57	60	first strand
Strand 2	Z	116	119	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7OX1

Analysis of interatomic Contacts of Structural Units in PDB entry:
7OX1