Analysis of interatomic Contacts of Structural Units in PDB entry:
7OX5

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7OX5 entry

There are 4 chains in PDB entry 7OX5 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 47	ALA 256
B	GLY 20	ARG 138
C	ARG 52	PRO 257
D	GLY 20	GLU 135

There are 96 helices in PDB entry 7OX5. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	50	52	Right-handed 310
Helix 2	AA2	A	107	111	Right-handed 310
Helix 3	AA3	A	140	144	Right-handed 310
Helix 4	AA4	A	169	177	Right-handed 310
Helix 5	AA5	A	191	195	Right-handed 310
Helix 6	AA6	A	236	240	Right-handed 310
Helix 7	AA7	B	23	38	Right-handed alpha
Helix 8	AA8	B	40	45	Right-handed alpha
Helix 9	AA9	B	68	76	Right-handed alpha
Helix 10	AB1	B	79	85	Right-handed alpha
Helix 11	AB2	B	85	102	Right-handed alpha
Helix 12	AB3	B	104	108	Right-handed 310
Helix 13	AB4	B	120	137	Right-handed alpha
Helix 14	AB5	C	107	111	Right-handed 310
Helix 15	AB6	C	140	144	Right-handed 310
Helix 16	AB7	C	169	177	Right-handed 310
Helix 17	AB8	C	191	195	Right-handed 310
Helix 18	AB9	D	23	38	Right-handed alpha
Helix 19	AC1	D	40	45	Right-handed alpha
Helix 20	AC2	D	68	76	Right-handed alpha
Helix 21	AC3	D	79	85	Right-handed alpha
Helix 22	AC4	D	85	102	Right-handed alpha
Helix 23	AC5	D	104	108	Right-handed 310
Helix 24	AC6	D	120	141	Right-handed alpha
Helix 25	AC7	E	107	111	Right-handed 310
Helix 26	AC8	E	140	144	Right-handed 310
Helix 27	AC9	E	169	177	Right-handed 310
Helix 28	AD1	F	23	38	Right-handed alpha
Helix 29	AD2	F	40	45	Right-handed alpha
Helix 30	AD3	F	68	76	Right-handed alpha
Helix 31	AD4	F	79	85	Right-handed alpha
Helix 32	AD5	F	85	102	Right-handed alpha
Helix 33	AD6	F	104	108	Right-handed 310
Helix 34	AD7	F	120	138	Right-handed alpha
Helix 35	AD8	G	107	111	Right-handed 310
Helix 36	AD9	G	140	144	Right-handed 310
Helix 37	AE1	G	169	177	Right-handed 310
Helix 38	AE2	G	191	195	Right-handed 310
Helix 39	AE3	G	210	214	Right-handed 310
Helix 40	AE4	G	236	240	Right-handed 310
Helix 41	AE5	H	23	38	Right-handed alpha
Helix 42	AE6	H	40	45	Right-handed alpha
Helix 43	AE7	H	68	76	Right-handed alpha
Helix 44	AE8	H	79	85	Right-handed alpha
Helix 45	AE9	H	85	102	Right-handed alpha
Helix 46	AF1	H	104	108	Right-handed 310
Helix 47	AF2	H	120	138	Right-handed alpha
Helix 48	AF3	I	107	111	Right-handed 310
Helix 49	AF4	I	140	144	Right-handed 310
Helix 50	AF5	I	169	177	Right-handed 310
Helix 51	AF6	I	191	195	Right-handed 310
Helix 52	AF7	I	236	240	Right-handed 310
Helix 53	AF8	J	23	38	Right-handed alpha
Helix 54	AF9	J	40	45	Right-handed alpha
Helix 55	AG1	J	68	76	Right-handed alpha
Helix 56	AG2	J	79	85	Right-handed alpha
Helix 57	AG3	J	85	102	Right-handed alpha
Helix 58	AG4	J	104	108	Right-handed 310
Helix 59	AG5	J	120	138	Right-handed alpha
Helix 60	AG6	K	107	111	Right-handed 310
Helix 61	AG7	K	140	144	Right-handed 310
Helix 62	AG8	K	169	177	Right-handed 310
Helix 63	AG9	K	191	195	Right-handed 310
Helix 64	AH1	K	210	214	Right-handed 310
Helix 65	AH2	L	23	38	Right-handed alpha
Helix 66	AH3	L	40	45	Right-handed alpha
Helix 67	AH4	L	68	76	Right-handed alpha
Helix 68	AH5	L	79	85	Right-handed alpha
Helix 69	AH6	L	85	102	Right-handed alpha
Helix 70	AH7	L	104	108	Right-handed 310
Helix 71	AH8	L	120	138	Right-handed alpha
Helix 72	AH9	M	107	111	Right-handed 310
Helix 73	AI1	M	140	144	Right-handed 310
Helix 74	AI2	M	169	177	Right-handed 310
Helix 75	AI3	M	191	195	Right-handed 310
Helix 76	AI4	M	210	214	Right-handed 310
Helix 77	AI5	M	236	240	Right-handed 310
Helix 78	AI6	N	23	38	Right-handed alpha
Helix 79	AI7	N	40	45	Right-handed alpha
Helix 80	AI8	N	68	76	Right-handed alpha
Helix 81	AI9	N	79	85	Right-handed alpha
Helix 82	AJ1	N	85	102	Right-handed alpha
Helix 83	AJ2	N	104	108	Right-handed 310
Helix 84	AJ3	N	120	138	Right-handed alpha
Helix 85	AJ4	O	107	111	Right-handed 310
Helix 86	AJ5	O	140	144	Right-handed 310
Helix 87	AJ6	O	169	177	Right-handed 310
Helix 88	AJ7	O	191	195	Right-handed 310
Helix 89	AJ8	O	236	240	Right-handed 310
Helix 90	AJ9	P	23	38	Right-handed alpha
Helix 91	AK1	P	40	45	Right-handed alpha
Helix 92	AK2	P	68	76	Right-handed alpha
Helix 93	AK3	P	79	85	Right-handed alpha
Helix 94	AK4	P	85	102	Right-handed alpha
Helix 95	AK5	P	104	108	Right-handed 310
Helix 96	AK6	P	120	138	Right-handed alpha

There are 36 sheets in PDB entry 7OX5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	54	58	first strand
Strand 2	A	63	68	anti-parallel
Strand 3	A	101	105	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	92	96	first strand
Strand 2	A	80	85	anti-parallel
Strand 3	A	118	125	anti-parallel
Strand 4	A	131	139	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	151	158	first strand
Strand 2	A	161	167	anti-parallel
Strand 3	A	206	209	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	196	202	first strand
Strand 2	A	179	187	anti-parallel
Strand 3	A	219	228	anti-parallel
Strand 4	A	252	255	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	116	119	first strand
Strand 2	B	53	60	anti-parallel
Strand 3	H	53	60	anti-parallel
Strand 4	H	116	119	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	54	58	first strand
Strand 2	C	63	68	anti-parallel
Strand 3	C	101	105	anti-parallel

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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	130	139	first strand
Strand 2	C	118	126	anti-parallel
Strand 3	C	80	85	anti-parallel
Strand 4	C	90	96	anti-parallel
Strand 5	G	91	96	anti-parallel
Strand 6	G	80	85	anti-parallel
Strand 7	G	118	127	anti-parallel
Strand 8	G	130	139	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	151	158	first strand
Strand 2	C	161	167	anti-parallel
Strand 3	C	206	209	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	196	202	first strand
Strand 2	C	179	187	anti-parallel
Strand 3	C	219	228	anti-parallel
Strand 4	C	252	255	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	117	119	first strand
Strand 2	D	53	59	anti-parallel
Strand 3	F	53	60	anti-parallel
Strand 4	F	116	119	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	54	58	first strand
Strand 2	E	63	68	anti-parallel
Strand 3	E	101	105	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	92	95	first strand
Strand 2	E	81	85	anti-parallel
Strand 3	E	118	122	anti-parallel
Strand 4	E	134	139	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	151	157	first strand
Strand 2	E	162	167	anti-parallel
Strand 3	E	206	208	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	196	202	first strand
Strand 2	E	179	187	anti-parallel
Strand 3	E	219	228	anti-parallel
Strand 4	E	252	255	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	54	58	first strand
Strand 2	G	63	68	anti-parallel
Strand 3	G	101	105	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	151	158	first strand
Strand 2	G	161	167	anti-parallel
Strand 3	G	206	209	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	196	202	first strand
Strand 2	G	179	186	anti-parallel
Strand 3	G	220	228	anti-parallel
Strand 4	G	252	254	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	54	58	first strand
Strand 2	I	63	68	anti-parallel
Strand 3	I	103	105	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	92	96	first strand
Strand 2	I	80	85	anti-parallel
Strand 3	I	118	124	anti-parallel
Strand 4	I	132	139	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	151	158	first strand
Strand 2	I	161	167	anti-parallel
Strand 3	I	206	208	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	196	202	first strand
Strand 2	I	179	186	anti-parallel
Strand 3	I	220	228	anti-parallel
Strand 4	I	252	254	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	57	60	first strand
Strand 2	J	116	119	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	54	58	first strand
Strand 2	K	63	68	anti-parallel
Strand 3	K	101	105	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	93	96	first strand
Strand 2	K	80	85	anti-parallel
Strand 3	K	118	124	anti-parallel
Strand 4	K	132	139	anti-parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	151	158	first strand
Strand 2	K	161	167	anti-parallel
Strand 3	K	206	209	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	196	202	first strand
Strand 2	K	179	187	anti-parallel
Strand 3	K	219	228	anti-parallel
Strand 4	K	252	255	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	117	119	first strand
Strand 2	L	53	59	anti-parallel
Strand 3	P	53	59	anti-parallel
Strand 4	P	117	119	anti-parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	54	58	first strand
Strand 2	M	63	68	anti-parallel
Strand 3	M	101	105	anti-parallel

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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	92	96	first strand
Strand 2	M	80	85	anti-parallel
Strand 3	M	118	124	anti-parallel
Strand 4	M	132	139	anti-parallel

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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	151	158	first strand
Strand 2	M	161	167	anti-parallel
Strand 3	M	206	209	anti-parallel

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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	196	202	first strand
Strand 2	M	179	187	anti-parallel
Strand 3	M	219	228	anti-parallel
Strand 4	M	252	255	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	57	60	first strand
Strand 2	N	116	119	anti-parallel

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There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	54	58	first strand
Strand 2	O	63	68	anti-parallel
Strand 3	O	101	105	anti-parallel

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There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	92	96	first strand
Strand 2	O	80	85	anti-parallel
Strand 3	O	118	123	anti-parallel
Strand 4	O	134	139	anti-parallel

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There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	151	158	first strand
Strand 2	O	161	167	anti-parallel
Strand 3	O	206	209	anti-parallel

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There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	196	202	first strand
Strand 2	O	179	186	anti-parallel
Strand 3	O	219	228	anti-parallel
Strand 4	O	252	255	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7OX5

Analysis of interatomic Contacts of Structural Units in PDB entry:
7OX5