Analysis of interatomic Contacts of Structural Units in PDB entry:
7OY2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7OY2 entry

There are 3 chains in PDB entry 7OY2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 ASP 3TYR 378
C
 TRP 2MET 504
X
 MET 1LEU 28
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 7OY2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
3 40Right-handed alpha
Helix 2
AA2
B
42 52Right-handed alpha
Helix 3
AA3
B
56 75Right-handed alpha
Helix 4
AA4
B
75 86Right-handed alpha
Helix 5
AA5
B
86 107Right-handed alpha
Helix 6
AA6
B
108 110Right-handed 310
Helix 7
AA7
B
112 144Right-handed alpha
Helix 8
AA8
B
160 165Right-handed alpha
Helix 9
AA9
B
166 192Right-handed alpha
Helix 10
AB1
B
193 226Right-handed alpha
Helix 11
AB2
B
255 261Right-handed alpha
Helix 12
AB3
B
262 264Right-handed 310
Helix 13
AB4
B
265 284Right-handed alpha
Helix 14
AB5
B
286 310Right-handed alpha
Helix 15
AB6
B
319 323Right-handed 310
Helix 16
AB7
B
332 362Right-handed alpha
Helix 17
AB8
B
366 373Right-handed alpha
Helix 18
AB9
C
3 44Right-handed alpha
Helix 19
AC1
C
45 81Right-handed alpha
Helix 20
AC2
C
81 117Right-handed alpha
Helix 21
AC3
C
122 153Right-handed alpha
Helix 22
AC4
C
170 176Right-handed alpha
Helix 23
AC5
C
177 209Right-handed alpha
Helix 24
AC6
C
212 249Right-handed alpha
Helix 25
AC7
C
249 257Right-handed alpha
Helix 26
AC8
C
310 333Right-handed alpha
Helix 27
AC9
C
337 348Right-handed alpha
Helix 28
AD1
C
350 361Right-handed alpha
Helix 29
AD2
C
368 379Right-handed alpha
Helix 30
AD3
C
382 414Right-handed alpha
Helix 31
AD4
C
419 429Right-handed alpha
Helix 32
AD5
C
431 447Right-handed alpha
Helix 33
AD6
C
459 463Right-handed alpha
Helix 34
AD7
C
467 500Right-handed alpha
Helix 35
AD8
C
501 504Right-handed 310
Helix 36
AD9
X
2 25Right-handed alpha
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There are 5 sheets in PDB entry 7OY2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
147 149first strand
Strand 2
B
155 157anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
227 233first strand
Strand 2
B
246 251anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
312 314first strand
Strand 2
B
324 325anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
157 160first strand
Strand 2
C
165 168anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
451 453first strand
Strand 2
C
457 458anti-parallel
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