Analysis of interatomic Contacts of Structural Units in PDB entry:
7OYX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7OYX entry

There are 2 chains in PDB entry 7OYX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 29HIS 375
B
 GLN 29TYR 293
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 45 helices in PDB entry 7OYX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
44 54Right-handed alpha
Helix 2
AA2
A
64 75Right-handed alpha
Helix 3
AA3
A
85 93Right-handed alpha
Helix 4
AA4
A
94 96Right-handed 310
Helix 5
AA5
A
102 112Right-handed 310
Helix 6
AA6
A
113 121Right-handed alpha
Helix 7
AA7
A
122 123Right-handed 310
Helix 8
AA8
A
124 128Right-handed 310
Helix 9
AA9
A
144 152Right-handed alpha
Helix 10
AB1
A
160 165Right-handed alpha
Helix 11
AB2
A
165 173Right-handed alpha
Helix 12
AB3
A
182 194Right-handed alpha
Helix 13
AB4
A
202 208Right-handed alpha
Helix 14
AB5
A
208 218Right-handed alpha
Helix 15
AB6
A
219 221Right-handed 310
Helix 16
AB7
A
228 235Right-handed alpha
Helix 17
AB8
A
245 259Right-handed alpha
Helix 18
AB9
A
288 300Right-handed alpha
Helix 19
AC1
A
301 313Right-handed alpha
Helix 20
AC2
A
321 325Right-handed 310
Helix 21
AC3
A
326 331Right-handed alpha
Helix 22
AC4
A
338 343Right-handed alpha
Helix 23
AC5
A
352 368Right-handed alpha
Helix 24
AC6
B
44 54Right-handed alpha
Helix 25
AC7
B
64 75Right-handed alpha
Helix 26
AC8
B
85 93Right-handed alpha
Helix 27
AC9
B
102 112Right-handed 310
Helix 28
AD1
B
113 121Right-handed alpha
Helix 29
AD2
B
122 123Right-handed 310
Helix 30
AD3
B
124 128Right-handed 310
Helix 31
AD4
B
144 152Right-handed alpha
Helix 32
AD5
B
160 165Right-handed alpha
Helix 33
AD6
B
165 173Right-handed alpha
Helix 34
AD7
B
182 194Right-handed alpha
Helix 35
AD8
B
202 208Right-handed alpha
Helix 36
AD9
B
208 218Right-handed alpha
Helix 37
AE1
B
219 221Right-handed 310
Helix 38
AE2
B
228 235Right-handed alpha
Helix 39
AE3
B
245 259Right-handed alpha
Helix 40
AE4
B
288 300Right-handed alpha
Helix 41
AE5
B
301 313Right-handed alpha
Helix 42
AE6
B
321 325Right-handed 310
Helix 43
AE7
B
326 331Right-handed alpha
Helix 44
AE8
B
338 343Right-handed alpha
Helix 45
AE9
B
352 368Right-handed alpha
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There are 6 sheets in PDB entry 7OYX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
56 62first strand
Strand 2
A
31 37parallel
Strand 3
A
81 82parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
223 224first strand
Strand 2
A
177 179parallel
Strand 3
A
240 244parallel
Strand 4
A
131 143anti-parallel
Strand 5
A
315 316anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
264 267first strand
Strand 2
A
131 143anti-parallel
Strand 3
A
273 280anti-parallel
Strand 4
A
345 346parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
56 62first strand
Strand 2
B
31 37parallel
Strand 3
B
81 82parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
223 224first strand
Strand 2
B
177 179parallel
Strand 3
B
240 244parallel
Strand 4
B
130 143anti-parallel
Strand 5
B
315 316anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
264 267first strand
Strand 2
B
130 143anti-parallel
Strand 3
B
273 281anti-parallel
Strand 4
B
345 346parallel
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