Analysis of interatomic Contacts of Structural Units in PDB entry:
7OZ3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7OZ3 entry

There are 6 chains in PDB entry 7OZ3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ILE 8LEU 209
B
ILE 8ARG 210
C
THR 10ARG 210
D
TYR 13ARG 210
F
C 3 T 46
G
A 1 G 44
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 7OZ3. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
11 27Right-handed alpha
Helix 2
AA2
A
39 46Right-handed alpha
Helix 3
AA3
A
48 62Right-handed alpha
Helix 4
AA4
A
78 128Right-handed alpha
Helix 5
AA5
A
129 132Right-handed 310
Helix 6
AA6
A
152 157Right-handed alpha
Helix 7
AA7
A
157 163Right-handed alpha
Helix 8
AA8
A
196 207Right-handed alpha
Helix 9
AA9
B
11 27Right-handed alpha
Helix 10
AB1
B
40 46Right-handed alpha
Helix 11
AB2
B
48 62Right-handed alpha
Helix 12
AB3
B
78 128Right-handed alpha
Helix 13
AB4
B
129 132Right-handed 310
Helix 14
AB5
B
152 157Right-handed alpha
Helix 15
AB6
B
157 163Right-handed alpha
Helix 16
AB7
B
196 207Right-handed alpha
Helix 17
AB8
C
11 27Right-handed alpha
Helix 18
AB9
C
37 46Right-handed alpha
Helix 19
AC1
C
48 62Right-handed alpha
Helix 20
AC2
C
77 92Right-handed alpha
Helix 21
AC3
C
94 127Right-handed alpha
Helix 22
AC4
C
153 157Right-handed alpha
Helix 23
AC5
C
157 163Right-handed alpha
Helix 24
AC6
C
196 208Right-handed alpha
Helix 25
AC7
D
14 26Right-handed alpha
Helix 26
AC8
D
37 45Right-handed alpha
Helix 27
AC9
D
48 62Right-handed alpha
Helix 28
AD1
D
78 92Right-handed alpha
Helix 29
AD2
D
94 126Right-handed alpha
Helix 30
AD3
D
132 136Right-handed 310
Helix 31
AD4
D
153 157Right-handed alpha
Helix 32
AD5
D
157 163Right-handed alpha
Helix 33
AD6
D
196 207Right-handed alpha
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There are 9 sheets in PDB entry 7OZ3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
34 35first strand
Strand 2
A
72 75anti-parallel
Strand 3
A
65 68anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
138 141first strand
Strand 2
A
190 194anti-parallel
Strand 3
A
165 171anti-parallel
Strand 4
A
174 177anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
34 35first strand
Strand 2
B
72 75anti-parallel
Strand 3
B
65 68anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
140 141first strand
Strand 2
B
190 194anti-parallel
Strand 3
B
165 171anti-parallel
Strand 4
B
174 177anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
65 66first strand
Strand 2
C
74 75anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
138 141first strand
Strand 2
C
190 194anti-parallel
Strand 3
C
165 170anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
151 152first strand
Strand 2
C
184 185anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
138 141first strand
Strand 2
D
190 194anti-parallel
Strand 3
D
165 171anti-parallel
Strand 4
D
174 177anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
151 152first strand
Strand 2
D
184 185anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il