Analysis of interatomic Contacts of Structural Units in PDB entry:
7OZJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7OZJ entry

There are 3 chains in PDB entry 7OZJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 59HIS 290
B
 ALA 34TYR 241
C
 VAL 2ILE 233
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 7OZJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
59 62Right-handed 310
Helix 2
AA2
A
63 69Right-handed alpha
Helix 3
AA3
A
105 114Right-handed alpha
Helix 4
AA4
A
165 170Right-handed 310
Helix 5
AA5
A
219 223Right-handed 310
Helix 6
AA6
B
83 87Right-handed 310
Helix 7
AA7
B
142 147Right-handed alpha
Helix 8
AA8
B
157 161Right-handed 310
Helix 9
AA9
B
166 173Right-handed 310
Helix 10
AB1
B
221 225Right-handed 310
Helix 11
AB2
C
42 48Right-handed alpha
Helix 12
AB3
C
62 66Right-handed 310
Helix 13
AB4
C
92 96Right-handed 310
Helix 14
AB5
C
97 103Right-handed alpha
Helix 15
AB6
C
104 106Right-handed 310
Helix 16
AB7
C
143 150Right-handed alpha
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There are 9 sheets in PDB entry 7OZJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
72 81first strand
Strand 2
A
240 258anti-parallel
Strand 3
A
115 132anti-parallel
Strand 4
A
198 199anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
185 189first strand
Strand 2
A
115 132anti-parallel
Strand 3
A
240 258anti-parallel
Strand 4
C
39 40anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
175 179first strand
Strand 2
A
147 153anti-parallel
Strand 3
A
226 231anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
64 65first strand
Strand 2
B
230 235anti-parallel
Strand 3
B
106 112anti-parallel
Strand 4
B
185 190anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
153 154first strand
Strand 2
B
78 82anti-parallel
Strand 3
B
207 218anti-parallel
Strand 4
B
119 128anti-parallel
Strand 5
B
175 179anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
51 52first strand
Strand 2
C
210 218anti-parallel
Strand 3
C
68 71anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
51 52first strand
Strand 2
C
210 218anti-parallel
Strand 3
C
113 119anti-parallel
Strand 4
C
164 167anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
80 85first strand
Strand 2
C
191 196anti-parallel
Strand 3
C
128 134anti-parallel
Strand 4
C
152 156anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
109 110first strand
Strand 2
C
223 224anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il