Analysis of interatomic Contacts of Structural Units in PDB entry:
7P01


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7P01 entry

There are 2 chains in PDB entry 7P01 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 10HIS 581
B
 GLU 11LYS 66
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 63 helices in PDB entry 7P01. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
14 20Right-handed alpha
Helix 2
AA2
A
26 31Right-handed alpha
Helix 3
AA3
A
40 47Right-handed alpha
Helix 4
AA4
A
47 54Right-handed alpha
Helix 5
AA5
A
84 87Right-handed 310
Helix 6
AA6
A
88 102Right-handed alpha
Helix 7
AA7
A
119 128Right-handed alpha
Helix 8
AA8
A
133 137Right-handed 310
Helix 9
AA9
A
190 201Right-handed alpha
Helix 10
AB1
A
202 207Right-handed alpha
Helix 11
AB2
A
242 247Right-handed alpha
Helix 12
AB3
A
251 263Right-handed alpha
Helix 13
AB4
A
264 267Right-handed 310
Helix 14
AB5
A
279 288Right-handed alpha
Helix 15
AB6
A
289 292Right-handed 310
Helix 16
AB7
A
301 305Right-handed 310
Helix 17
AB8
A
309 312Right-handed 310
Helix 18
AB9
A
318 331Right-handed alpha
Helix 19
AC1
A
331 336Right-handed alpha
Helix 20
AC2
A
351 357Right-handed alpha
Helix 21
AC3
A
361 378Right-handed alpha
Helix 22
AC4
A
388 392Right-handed 310
Helix 23
AC5
A
401 405Right-handed 310
Helix 24
AC6
A
407 421Right-handed alpha
Helix 25
AC7
A
424 439Right-handed alpha
Helix 26
AC8
A
440 444Right-handed 310
Helix 27
AC9
A
452 457Right-handed 310
Helix 28
AD1
A
474 480Right-handed alpha
Helix 29
AD2
A
484 499Right-handed alpha
Helix 30
AD3
A
499 504Right-handed alpha
Helix 31
AD4
A
545 549Right-handed 310
Helix 32
AD5
A
561 565Right-handed 310
Helix 33
AD6
B
14 20Right-handed alpha
Helix 34
AD7
B
26 30Right-handed 310
Helix 35
AD8
B
40 47Right-handed alpha
Helix 36
AD9
B
47 54Right-handed alpha
Helix 37
AE1
B
84 87Right-handed 310
Helix 38
AE2
B
88 102Right-handed alpha
Helix 39
AE3
B
119 126Right-handed alpha
Helix 40
AE4
B
133 137Right-handed 310
Helix 41
AE5
B
190 201Right-handed alpha
Helix 42
AE6
B
202 207Right-handed alpha
Helix 43
AE7
B
242 247Right-handed alpha
Helix 44
AE8
B
251 263Right-handed alpha
Helix 45
AE9
B
264 267Right-handed 310
Helix 46
AF1
B
279 288Right-handed alpha
Helix 47
AF2
B
289 292Right-handed 310
Helix 48
AF3
B
301 305Right-handed 310
Helix 49
AF4
B
309 312Right-handed 310
Helix 50
AF5
B
318 331Right-handed alpha
Helix 51
AF6
B
331 336Right-handed alpha
Helix 52
AF7
B
351 357Right-handed alpha
Helix 53
AF8
B
361 378Right-handed alpha
Helix 54
AF9
B
401 405Right-handed 310
Helix 55
AG1
B
407 421Right-handed alpha
Helix 56
AG2
B
424 439Right-handed alpha
Helix 57
AG3
B
440 444Right-handed 310
Helix 58
AG4
B
452 457Right-handed 310
Helix 59
AG5
B
474 480Right-handed alpha
Helix 60
AG6
B
484 499Right-handed alpha
Helix 61
AG7
B
499 504Right-handed alpha
Helix 62
AG8
B
545 549Right-handed 310
Helix 63
AG9
B
561 565Right-handed 310
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There are 14 sheets in PDB entry 7P01. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
296 298first strand
Strand 2
A
270 274parallel
Strand 3
A
212 215parallel
Strand 4
A
105 110parallel
Strand 5
A
58 61parallel
Strand 6
A
21 25parallel
Strand 7
A
382 386parallel
Strand 8
A
341 342parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
65 66first strand
Strand 2
A
78 82anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
139 140first strand
Strand 2
A
173 176anti-parallel
Strand 3
A
165 168anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
143 144first strand
Strand 2
A
150 151anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
307 308first strand
Strand 2
A
313 314anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
507 511first strand
Strand 2
A
518 524anti-parallel
Strand 3
A
530 536anti-parallel
Strand 4
A
575 580anti-parallel
Strand 5
A
553 558anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
542 543first strand
Strand 2
A
569 570anti-parallel
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There are 8 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
296 298first strand
Strand 2
B
270 274parallel
Strand 3
B
212 215parallel
Strand 4
B
105 110parallel
Strand 5
B
58 61parallel
Strand 6
B
21 25parallel
Strand 7
B
382 386parallel
Strand 8
B
341 342parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
65 66first strand
Strand 2
B
78 82anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
139 140first strand
Strand 2
B
173 176anti-parallel
Strand 3
B
165 168anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
143 144first strand
Strand 2
B
150 151anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
307 308first strand
Strand 2
B
313 314anti-parallel
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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
507 511first strand
Strand 2
B
518 524anti-parallel
Strand 3
B
530 536anti-parallel
Strand 4
B
575 580anti-parallel
Strand 5
B
553 558anti-parallel
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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
542 543first strand
Strand 2
B
569 570anti-parallel
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