Analysis of interatomic Contacts of Structural Units in PDB entry:
7P02

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7P02 entry

There are 6 chains in PDB entry 7P02 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
H	ASP 18	LEU 264
B	ARG 8	ASN 340
G	ALA 12	ARG 62
A	CYS 3	LEU 377
R	PRO 22	ALA 319
P	LYS 3	MET 11

There are 32 helices in PDB entry 7P02. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	H	45	49	Right-handed 310
Helix 2	AA2	H	79	82	Right-handed 310
Helix 3	AA3	H	104	108	Right-handed 310
Helix 4	AA4	B	9	26	Right-handed alpha
Helix 5	AA5	B	29	34	Right-handed alpha
Helix 6	AA6	B	35	37	Right-handed 310
Helix 7	AA7	B	85	87	Right-handed 310
Helix 8	AA8	G	13	25	Right-handed alpha
Helix 9	AA9	G	29	44	Right-handed alpha
Helix 10	AB1	A	6	33	Right-handed alpha
Helix 11	AB2	A	45	49	Right-handed 310
Helix 12	AB3	A	224	229	Right-handed alpha
Helix 13	AB4	A	246	262	Right-handed alpha
Helix 14	AB5	A	263	266	Right-handed 310
Helix 15	AB6	A	276	287	Right-handed alpha
Helix 16	AB7	A	290	295	Right-handed alpha
Helix 17	AB8	A	296	301	Right-handed alpha
Helix 18	AB9	A	314	335	Right-handed alpha
Helix 19	AC1	A	353	374	Right-handed alpha
Helix 20	AC2	R	28	60	Right-handed alpha
Helix 21	AC3	R	66	84	Right-handed alpha
Helix 22	AC4	R	84	96	Right-handed alpha
Helix 23	AC5	R	101	109	Right-handed alpha
Helix 24	AC6	R	110	136	Right-handed alpha
Helix 25	AC7	R	143	168	Right-handed alpha
Helix 26	AC8	R	190	205	Right-handed alpha
Helix 27	AC9	R	205	225	Right-handed alpha
Helix 28	AD1	R	238	274	Right-handed alpha
Helix 29	AD2	R	274	279	Right-handed alpha
Helix 30	AD3	R	281	296	Right-handed alpha
Helix 31	AD4	R	296	309	Right-handed alpha
Helix 32	AD5	R	309	319	Right-handed alpha

There are 14 sheets in PDB entry 7P02. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	20	24	first strand
Strand 2	H	35	42	anti-parallel
Strand 3	H	95	100	anti-parallel
Strand 4	H	85	90	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	27	29	first strand
Strand 2	H	132	136	parallel
Strand 3	H	109	116	anti-parallel
Strand 4	H	50	56	anti-parallel
Strand 5	H	62	68	anti-parallel
Strand 6	H	75	77	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	157	158	first strand
Strand 2	H	172	178	anti-parallel
Strand 3	H	228	233	anti-parallel
Strand 4	H	220	224	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	163	165	first strand
Strand 2	H	260	263	parallel
Strand 3	H	242	248	anti-parallel
Strand 4	H	191	196	anti-parallel
Strand 5	H	203	207	anti-parallel
Strand 6	H	211	212	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	46	52	first strand
Strand 2	B	335	340	anti-parallel
Strand 3	B	327	330	anti-parallel
Strand 4	B	317	320	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	58	63	first strand
Strand 2	B	69	74	anti-parallel
Strand 3	B	78	83	anti-parallel
Strand 4	B	89	94	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	100	105	first strand
Strand 2	B	111	116	anti-parallel
Strand 3	B	121	125	anti-parallel
Strand 4	B	134	139	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	146	151	first strand
Strand 2	B	156	161	anti-parallel
Strand 3	B	166	170	anti-parallel
Strand 4	B	175	180	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	187	192	first strand
Strand 2	B	198	203	anti-parallel
Strand 3	B	207	212	anti-parallel
Strand 4	B	218	223	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	229	234	first strand
Strand 2	B	240	245	anti-parallel
Strand 3	B	250	254	anti-parallel
Strand 4	B	259	264	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	273	278	first strand
Strand 2	B	284	289	anti-parallel
Strand 3	B	294	298	anti-parallel
Strand 4	B	303	308	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	34	37	first strand
Strand 2	A	210	215	parallel
Strand 3	A	202	207	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	39	40	first strand
Strand 2	A	239	242	parallel
Strand 3	A	272	275	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	169	173	first strand
Strand 2	R	178	182	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7P02

Analysis of interatomic Contacts of Structural Units in PDB entry:
7P02