Analysis of interatomic Contacts of Structural Units in PDB entry:
7P05


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7P05 entry

There is 1 chain in PDB entry 7P05 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 31PRO 1502
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 65 helices in PDB entry 7P05. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
36 56Right-handed alpha
Helix 2
AA2
A
103 116Right-handed alpha
Helix 3
AA3
A
151 165Right-handed alpha
Helix 4
AA4
A
198 207Right-handed alpha
Helix 5
AA5
A
228 234Right-handed alpha
Helix 6
AA6
A
253 266Right-handed alpha
Helix 7
AA7
A
275 291Right-handed alpha
Helix 8
AA8
A
293 297Right-handed 310
Helix 9
AA9
A
310 326Right-handed alpha
Helix 10
AB1
A
340 359Right-handed alpha
Helix 11
AB2
A
370 375Right-handed alpha
Helix 12
AB3
A
396 405Right-handed alpha
Helix 13
AB4
A
413 421Right-handed alpha
Helix 14
AB5
A
430 436Right-handed alpha
Helix 15
AB6
A
443 454Right-handed alpha
Helix 16
AB7
A
454 470Right-handed alpha
Helix 17
AB8
A
500 519Right-handed alpha
Helix 18
AB9
A
519 548Right-handed alpha
Helix 19
AC1
A
549 551Right-handed 310
Helix 20
AC2
A
552 569Right-handed alpha
Helix 21
AC3
A
571 573Right-handed 310
Helix 22
AC4
A
574 591Right-handed alpha
Helix 23
AC5
A
595 607Right-handed alpha
Helix 24
AC6
A
607 626Right-handed alpha
Helix 25
AC7
A
631 659Right-handed alpha
Helix 26
AC8
A
662 680Right-handed alpha
Helix 27
AC9
A
691 693Right-handed 310
Helix 28
AD1
A
694 701Right-handed alpha
Helix 29
AD2
A
701 716Right-handed alpha
Helix 30
AD3
A
729 733Right-handed 310
Helix 31
AD4
A
736 740Right-handed 310
Helix 32
AD5
A
756 764Right-handed alpha
Helix 33
AD6
A
767 771Right-handed 310
Helix 34
AD7
A
772 796Right-handed alpha
Helix 35
AD8
A
809 814Right-handed alpha
Helix 36
AD9
A
910 919Right-handed alpha
Helix 37
AE1
A
941 946Right-handed alpha
Helix 38
AE2
A
960 973Right-handed alpha
Helix 39
AE3
A
978 994Right-handed alpha
Helix 40
AE4
A
995 999Right-handed 310
Helix 41
AE5
A
1011 1025Right-handed alpha
Helix 42
AE6
A
1042 1060Right-handed alpha
Helix 43
AE7
A
1071 1076Right-handed alpha
Helix 44
AE8
A
1097 1099Right-handed 310
Helix 45
AE9
A
1100 1110Right-handed alpha
Helix 46
AF1
A
1120 1129Right-handed alpha
Helix 47
AF2
A
1140 1147Right-handed alpha
Helix 48
AF3
A
1148 1164Right-handed alpha
Helix 49
AF4
A
1183 1200Right-handed alpha
Helix 50
AF5
A
1202 1224Right-handed alpha
Helix 51
AF6
A
1230 1246Right-handed alpha
Helix 52
AF7
A
1247 1270Right-handed alpha
Helix 53
AF8
A
1277 1305Right-handed alpha
Helix 54
AF9
A
1309 1317Right-handed alpha
Helix 55
AG1
A
1319 1347Right-handed alpha
Helix 56
AG2
A
1351 1369Right-handed alpha
Helix 57
AG3
A
1375 1379Right-handed 310
Helix 58
AG4
A
1380 1382Right-handed 310
Helix 59
AG5
A
1383 1390Right-handed alpha
Helix 60
AG6
A
1390 1405Right-handed alpha
Helix 61
AG7
A
1412 1416Right-handed 310
Helix 62
AG8
A
1426 1431Right-handed alpha
Helix 63
AG9
A
1431 1438Right-handed alpha
Helix 64
AH1
A
1459 1468Right-handed alpha
Helix 65
AH2
A
1473 1500Right-handed alpha
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There are 7 sheets in PDB entry 7P05. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
172 182first strand
Strand 2
A
129 139anti-parallel
Strand 3
A
214 215anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
172 182first strand
Strand 2
A
129 139anti-parallel
Strand 3
A
220 223anti-parallel
Strand 4
A
226 227anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
239 242first strand
Strand 2
A
329 332parallel
Strand 3
A
361 365parallel
Strand 4
A
188 192parallel
Strand 5
A
379 384parallel
Strand 6
A
387 393anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
719 721first strand
Strand 2
A
753 755anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
885 895first strand
Strand 2
A
869 878anti-parallel
Strand 3
A
926 933anti-parallel
Strand 4
A
936 937anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
947 949first strand
Strand 2
A
1032 1035parallel
Strand 3
A
1062 1066parallel
Strand 4
A
899 905parallel
Strand 5
A
1080 1085parallel
Strand 6
A
1089 1094anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1417 1419first strand
Strand 2
A
1452 1455anti-parallel
Strand 3
A
1442 1443anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il