Analysis of interatomic Contacts of Structural Units in PDB entry:
7P0L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7P0L entry


Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and in LPC/CSU analysis.

There are 6 chains in PDB entry 7P0L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 387ASP 581
B
 THR 387ASP 581
C
 LYS 127PRO 128
C
 GLN 130LEU 132
D
 PRO 128PRO 128
D
 GLN 130LEU 132
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 7P0L. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
397 407Right-handed alpha
Helix 2
AA2
A
432 442Right-handed alpha
Helix 3
AA3
A
448 458Right-handed alpha
Helix 4
AA4
A
462 467Right-handed 310
Helix 5
AA5
A
470 478Right-handed alpha
Helix 6
AA6
A
498 504Right-handed alpha
Helix 7
AA7
A
507 520Right-handed alpha
Helix 8
AA8
A
527 532Right-handed alpha
Helix 9
AA9
A
545 553Right-handed alpha
Helix 10
AB1
A
561 571Right-handed alpha
Helix 11
AB2
A
574 579Right-handed alpha
Helix 12
AB3
B
397 405Right-handed alpha
Helix 13
AB4
B
432 442Right-handed alpha
Helix 14
AB5
B
448 458Right-handed alpha
Helix 15
AB6
B
462 467Right-handed 310
Helix 16
AB7
B
470 478Right-handed alpha
Helix 17
AB8
B
498 506Right-handed alpha
Helix 18
AB9
B
507 520Right-handed alpha
Helix 19
AC1
B
527 534Right-handed alpha
Helix 20
AC2
B
545 553Right-handed alpha
Helix 21
AC3
B
561 571Right-handed alpha
Helix 22
AC4
B
574 579Right-handed alpha
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There are 4 sheets in PDB entry 7P0L. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
410 411first strand
Strand 2
A
388 392parallel
Strand 3
A
421 424parallel
Strand 4
A
445 447parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
523 524first strand
Strand 2
A
494 497parallel
Strand 3
A
536 540parallel
Strand 4
A
558 560parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
410 412first strand
Strand 2
B
388 392parallel
Strand 3
B
419 424parallel
Strand 4
B
445 447parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
523 524first strand
Strand 2
B
494 497parallel
Strand 3
B
537 540parallel
Strand 4
B
558 560parallel
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