Analysis of interatomic Contacts of Structural Units in PDB entry:
7P1H

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7P1H entry

There are 4 chains in PDB entry 7P1H (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ARG 19	VAL 413
B	ASP 4	GLU 72
B	GLY 74	PHE 375
P	GLY 2	TYR 139

There are 44 helices in PDB entry 7P1H. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	19	36	Right-handed alpha
Helix 2	AA2	A	37	51	Right-handed alpha
Helix 3	AA3	A	61	71	Right-handed alpha
Helix 4	AA4	A	87	92	Right-handed alpha
Helix 5	AA5	A	97	101	Right-handed 310
Helix 6	AA6	A	105	122	Right-handed alpha
Helix 7	AA7	A	133	142	Right-handed alpha
Helix 8	AA8	A	224	226	Right-handed 310
Helix 9	AA9	A	227	232	Right-handed alpha
Helix 10	AB1	A	237	245	Right-handed alpha
Helix 11	AB2	A	252	260	Right-handed alpha
Helix 12	AB3	A	260	273	Right-handed alpha
Helix 13	AB4	A	276	290	Right-handed alpha
Helix 14	AB5	A	312	316	Right-handed 310
Helix 15	AB6	A	323	329	Right-handed 310
Helix 16	AB7	A	355	368	Right-handed alpha
Helix 17	AB8	A	376	384	Right-handed alpha
Helix 18	AB9	A	397	413	Right-handed alpha
Helix 19	AC1	B	54	61	Right-handed alpha
Helix 20	AC2	B	62	65	Right-handed 310
Helix 21	AC3	B	78	92	Right-handed alpha
Helix 22	AC4	B	112	126	Right-handed alpha
Helix 23	AC5	B	137	144	Right-handed alpha
Helix 24	AC6	B	172	175	Right-handed 310
Helix 25	AC7	B	181	195	Right-handed alpha
Helix 26	AC8	B	202	217	Right-handed alpha
Helix 27	AC9	B	222	233	Right-handed alpha
Helix 28	AD1	B	252	260	Right-handed alpha
Helix 29	AD2	B	261	262	Right-handed 310
Helix 30	AD3	B	263	268	Right-handed 310
Helix 31	AD4	B	273	284	Right-handed alpha
Helix 32	AD5	B	285	288	Right-handed 310
Helix 33	AD6	B	289	295	Right-handed alpha
Helix 34	AD7	B	301	305	Right-handed 310
Helix 35	AD8	B	308	321	Right-handed alpha
Helix 36	AD9	B	334	349	Right-handed alpha
Helix 37	AE1	B	351	356	Right-handed alpha
Helix 38	AE2	B	359	366	Right-handed alpha
Helix 39	AE3	B	368	374	Right-handed alpha
Helix 40	AE4	P	3	12	Right-handed alpha
Helix 41	AE5	P	38	42	Right-handed 310
Helix 42	AE6	P	43	51	Right-handed alpha
Helix 43	AE7	P	56	62	Right-handed alpha
Helix 44	AE8	P	119	137	Right-handed alpha

There are 11 sheets in PDB entry 7P1H. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	351	353	first strand
Strand 2	A	318	321	anti-parallel
Strand 3	A	53	57	anti-parallel
Strand 4	A	216	222	anti-parallel
Strand 5	A	371	372	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	126	129	first strand
Strand 2	A	199	202	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	131	132	first strand
Strand 2	A	182	191	anti-parallel
Strand 3	A	169	179	anti-parallel
Strand 4	A	158	164	anti-parallel
Strand 5	A	151	153	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	131	132	first strand
Strand 2	A	182	191	anti-parallel
Strand 3	A	194	197	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	29	32	first strand
Strand 2	B	16	21	anti-parallel
Strand 3	B	8	10	anti-parallel
Strand 4	B	103	107	parallel
Strand 5	B	131	136	parallel
Strand 6	B	357	358	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	35	37	first strand
Strand 2	B	66	68	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	71	72	first strand
Strand 2	B	75	76	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	169	170	first strand
Strand 2	B	160	166	anti-parallel
Strand 3	B	176	178	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	169	170	first strand
Strand 2	B	160	166	anti-parallel
Strand 3	B	150	155	anti-parallel
Strand 4	B	297	300	parallel
Strand 5	B	329	330	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	238	241	first strand
Strand 2	B	247	250	anti-parallel

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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	29	33	first strand
Strand 2	P	16	23	anti-parallel
Strand 3	P	108	114	anti-parallel
Strand 4	P	99	104	anti-parallel
Strand 5	P	84	89	anti-parallel
Strand 6	P	68	75	anti-parallel
Strand 7	P	63	65	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7P1H

Analysis of interatomic Contacts of Structural Units in PDB entry:
7P1H