Analysis of interatomic Contacts of Structural Units in PDB entry:
7P1Z


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7P1Z entry

There are 3 chains in PDB entry 7P1Z (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 SER 6ASP 228
C
 PHE 4HIS 229
A
 GLN 5LEU 227
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 7P1Z. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
29 33Right-handed 310
Helix 2
AA2
B
79 81Right-handed 310
Helix 3
AA3
B
179 191Right-handed alpha
Helix 4
AA4
B
193 197Right-handed 310
Helix 5
AA5
C
29 33Right-handed 310
Helix 6
AA6
C
79 83Right-handed 310
Helix 7
AA7
C
179 191Right-handed alpha
Helix 8
AA8
C
193 197Right-handed 310
Helix 9
AA9
A
29 33Right-handed 310
Helix 10
AB1
A
79 83Right-handed 310
Helix 11
AB2
A
179 191Right-handed alpha
Helix 12
AB3
A
193 197Right-handed 310
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There are 7 sheets in PDB entry 7P1Z. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
8 9first strand
Strand 2
B
34 44anti-parallel
Strand 3
B
49 58anti-parallel
Strand 4
B
198 223anti-parallel
Strand 5
B
100 110anti-parallel
Strand 6
B
122 131anti-parallel
Strand 7
B
161 167parallel
Strand 8
B
149 158anti-parallel
Strand 9
B
139 146anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
15 17first strand
Strand 2
B
21 24anti-parallel
Strand 3
B
68 72anti-parallel
Strand 4
B
198 223anti-parallel
Strand 5
B
87 94anti-parallel
Strand 6
B
174 178anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
83 85first strand
Strand 2
B
226 227anti-parallel
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There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
8 9first strand
Strand 2
C
34 44anti-parallel
Strand 3
C
49 58anti-parallel
Strand 4
C
198 223anti-parallel
Strand 5
C
99 110anti-parallel
Strand 6
C
122 131anti-parallel
Strand 7
C
161 167parallel
Strand 8
C
149 158anti-parallel
Strand 9
C
139 146anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
15 17first strand
Strand 2
C
21 24anti-parallel
Strand 3
C
68 72anti-parallel
Strand 4
C
198 223anti-parallel
Strand 5
C
87 94anti-parallel
Strand 6
C
174 178anti-parallel
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There are 9 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
8 9first strand
Strand 2
A
34 44anti-parallel
Strand 3
A
49 58anti-parallel
Strand 4
A
198 223anti-parallel
Strand 5
A
100 110anti-parallel
Strand 6
A
122 131anti-parallel
Strand 7
A
161 167parallel
Strand 8
A
149 158anti-parallel
Strand 9
A
139 146anti-parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
15 17first strand
Strand 2
A
21 24anti-parallel
Strand 3
A
68 72anti-parallel
Strand 4
A
198 223anti-parallel
Strand 5
A
87 94anti-parallel
Strand 6
A
174 178anti-parallel
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