Analysis of interatomic Contacts of Structural Units in PDB entry:
7P2Q


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7P2Q entry

There are 4 chains in PDB entry 7P2Q (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 25PRO 172
B
 ASN 2TYR 180
C
 TRP 51LYS 224
D
 PRO 66SER 151
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 7P2Q. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
26 56Right-handed alpha
Helix 2
AA2
A
160 171Right-handed alpha
Helix 3
AA3
B
3 33Right-handed alpha
Helix 4
AA4
C
52 72Right-handed alpha
Helix 5
AA5
C
79 105Right-handed alpha
Helix 6
AA6
C
106 109Right-handed 310
Helix 7
AA7
C
110 136Right-handed alpha
Helix 8
AA8
C
194 196Right-handed 310
Helix 9
AA9
C
207 224Right-handed alpha
Helix 10
AB1
D
67 73Right-handed alpha
Helix 11
AB2
D
80 109Right-handed alpha
Helix 12
AB3
D
112 131Right-handed alpha
Helix 13
AB4
D
135 140Right-handed alpha
Helix 14
AB5
D
140 145Right-handed alpha
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There are 6 sheets in PDB entry 7P2Q. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
62 64first strand
Strand 2
A
77 81anti-parallel
Strand 3
A
154 158anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
94 99first strand
Strand 2
A
104 115anti-parallel
Strand 3
A
121 126anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
47 55first strand
Strand 2
B
60 67anti-parallel
Strand 3
B
129 131anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
108 111first strand
Strand 2
B
84 87anti-parallel
Strand 3
B
147 151anti-parallel
Strand 4
B
159 161anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
102 104first strand
Strand 2
B
90 92anti-parallel
Strand 3
B
142 145anti-parallel
Strand 4
B
166 168anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
75 76first strand
Strand 2
C
139 144anti-parallel
Strand 3
C
156 162anti-parallel
Strand 4
C
169 178anti-parallel
Strand 5
C
183 192anti-parallel
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