Analysis of interatomic Contacts of Structural Units in PDB entry:
7P44

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7P44 entry

There are 2 chains in PDB entry 7P44 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	MET 706
B	ILE 6	ARG 572

There are 53 helices in PDB entry 7P44. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	7	9	Right-handed 310
Helix 2	AA2	A	10	17	Right-handed alpha
Helix 3	AA3	A	18	22	Right-handed 310
Helix 4	AA4	A	23	43	Right-handed alpha
Helix 5	AA5	A	52	64	Right-handed alpha
Helix 6	AA6	A	93	95	Right-handed 310
Helix 7	AA7	A	158	165	Right-handed alpha
Helix 8	AA8	A	202	206	Right-handed 310
Helix 9	AA9	A	214	222	Right-handed alpha
Helix 10	AB1	A	222	230	Right-handed alpha
Helix 11	AB2	A	244	248	Right-handed 310
Helix 12	AB3	A	264	278	Right-handed alpha
Helix 13	AB4	A	332	350	Right-handed alpha
Helix 14	AB5	A	359	365	Right-handed alpha
Helix 15	AB6	A	392	410	Right-handed alpha
Helix 16	AB7	A	445	457	Right-handed alpha
Helix 17	AB8	A	458	462	Right-handed 310
Helix 18	AB9	A	463	473	Right-handed alpha
Helix 19	AC1	A	486	491	Right-handed alpha
Helix 20	AC2	A	496	503	Right-handed alpha
Helix 21	AC3	A	517	538	Right-handed alpha
Helix 22	AC4	A	547	551	Right-handed 310
Helix 23	AC5	A	560	564	Right-handed 310
Helix 24	AC6	A	574	579	Right-handed alpha
Helix 25	AC7	A	583	601	Right-handed alpha
Helix 26	AC8	A	661	665	Right-handed 310
Helix 27	AC9	B	7	9	Right-handed 310
Helix 28	AD1	B	10	17	Right-handed alpha
Helix 29	AD2	B	18	22	Right-handed 310
Helix 30	AD3	B	23	43	Right-handed alpha
Helix 31	AD4	B	52	64	Right-handed alpha
Helix 32	AD5	B	93	95	Right-handed 310
Helix 33	AD6	B	158	165	Right-handed alpha
Helix 34	AD7	B	214	222	Right-handed alpha
Helix 35	AD8	B	222	230	Right-handed alpha
Helix 36	AD9	B	244	248	Right-handed 310
Helix 37	AE1	B	264	278	Right-handed alpha
Helix 38	AE2	B	312	316	Right-handed 310
Helix 39	AE3	B	332	349	Right-handed alpha
Helix 40	AE4	B	359	365	Right-handed alpha
Helix 41	AE5	B	380	385	Right-handed alpha
Helix 42	AE6	B	392	410	Right-handed alpha
Helix 43	AE7	B	430	434	Right-handed 310
Helix 44	AE8	B	444	456	Right-handed alpha
Helix 45	AE9	B	458	462	Right-handed 310
Helix 46	AF1	B	463	473	Right-handed alpha
Helix 47	AF2	B	496	501	Right-handed alpha
Helix 48	AF3	B	505	510	Right-handed alpha
Helix 49	AF4	B	517	538	Right-handed alpha
Helix 50	AF5	B	547	551	Right-handed 310
Helix 51	AF6	B	574	579	Right-handed alpha
Helix 52	AF7	B	583	601	Right-handed alpha
Helix 53	AF8	B	661	665	Right-handed 310

There are 16 sheets in PDB entry 7P44. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	65	68	first strand
Strand 2	A	75	80	anti-parallel
Strand 3	A	111	116	anti-parallel
Strand 4	A	105	106	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	102	103	first strand
Strand 2	A	86	91	anti-parallel
Strand 3	A	131	137	anti-parallel
Strand 4	A	143	146	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	102	103	first strand
Strand 2	A	86	91	anti-parallel
Strand 3	A	131	137	anti-parallel
Strand 4	A	170	172	anti-parallel
Strand 5	A	154	155	anti-parallel

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There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	197	201	first strand
Strand 2	A	233	236	parallel
Strand 3	A	281	286	parallel
Strand 4	A	354	357	parallel
Strand 5	A	415	418	parallel
Strand 6	A	440	442	parallel
Strand 7	A	480	482	parallel
Strand 8	A	541	545	parallel
Strand 9	A	197	201	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	240	241	first strand
Strand 2	A	254	258	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	291	292	first strand
Strand 2	A	325	326	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	610	615	first strand
Strand 2	A	620	625	anti-parallel
Strand 3	A	628	633	anti-parallel
Strand 4	A	698	704	anti-parallel
Strand 5	A	652	658	anti-parallel
Strand 6	A	676	677	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	640	647	first strand
Strand 2	A	688	694	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	65	68	first strand
Strand 2	B	75	80	anti-parallel
Strand 3	B	111	116	anti-parallel
Strand 4	B	105	106	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	102	103	first strand
Strand 2	B	86	91	anti-parallel
Strand 3	B	131	137	anti-parallel
Strand 4	B	143	146	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	102	103	first strand
Strand 2	B	86	91	anti-parallel
Strand 3	B	131	137	anti-parallel
Strand 4	B	170	172	anti-parallel
Strand 5	B	154	155	anti-parallel

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There are 9 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	197	202	first strand
Strand 2	B	233	237	parallel
Strand 3	B	281	286	parallel
Strand 4	B	354	357	parallel
Strand 5	B	415	418	parallel
Strand 6	B	440	442	parallel
Strand 7	B	480	482	parallel
Strand 8	B	541	545	parallel
Strand 9	B	197	202	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	240	241	first strand
Strand 2	B	254	258	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	291	292	first strand
Strand 2	B	325	326	anti-parallel

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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	610	615	first strand
Strand 2	B	620	625	anti-parallel
Strand 3	B	628	633	anti-parallel
Strand 4	B	698	704	anti-parallel
Strand 5	B	652	658	anti-parallel
Strand 6	B	676	677	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	640	647	first strand
Strand 2	B	688	694	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7P44

Analysis of interatomic Contacts of Structural Units in PDB entry:
7P44