Analysis of interatomic Contacts of Structural Units in PDB entry:
7P47


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7P47 entry

There are 5 chains in PDB entry 7P47 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 ASP 329LYS 773
C
 SER 3LYS 157
A
 HIS 23LEU 267
E
 THR 22GLU 94
D
 GLU 21GLY 98
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 7P47. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
329 361Right-handed alpha
Helix 2
AA2
B
741 769Right-handed alpha
Helix 3
AA3
B
770 772Right-handed 310
Helix 4
AA4
C
4 17Right-handed alpha
Helix 5
AA5
C
96 98Right-handed 310
Helix 6
AA6
C
108 121Right-handed alpha
Helix 7
AA7
C
131 140Right-handed alpha
Helix 8
AA8
C
140 155Right-handed alpha
Helix 9
AA9
A
24 50Right-handed alpha
Helix 10
AB1
A
57 80Right-handed alpha
Helix 11
AB2
A
141 156Right-handed alpha
Helix 12
AB3
A
206 213Right-handed alpha
Helix 13
AB4
A
238 254Right-handed alpha
Helix 14
AB5
E
45 57Right-handed alpha
Helix 15
AB6
E
59 63Right-handed 310
Helix 16
AB7
D
45 57Right-handed alpha
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There are 5 sheets in PDB entry 7P47. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
25 30first strand
Strand 2
C
36 46anti-parallel
Strand 3
C
57 63anti-parallel
Strand 4
C
74 76anti-parallel
Strand 5
C
91 94anti-parallel
Strand 6
D
97 98anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
178 179first strand
Strand 2
D
34 40anti-parallel
Strand 3
D
23 29anti-parallel
Strand 4
D
87 92parallel
Strand 5
D
64 67anti-parallel
Strand 6
D
70 71anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
203 205first strand
Strand 2
A
194 197anti-parallel
Strand 3
A
235 237anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
218 220first strand
Strand 2
A
229 231anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
264 265first strand
Strand 2
E
36 40parallel
Strand 3
E
23 29anti-parallel
Strand 4
E
87 92parallel
Strand 5
E
64 67anti-parallel
Strand 6
E
70 71anti-parallel
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