Analysis of interatomic Contacts of Structural Units in PDB entry:
7P56


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7P56 entry

There are 2 chains in PDB entry 7P56 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 27LYS 383
B
 ALA 27LYS 383
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 7P56. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
33 48Right-handed alpha
Helix 2
AA2
A
49 82Right-handed alpha
Helix 3
AA3
A
85 112Right-handed alpha
Helix 4
AA4
A
112 141Right-handed alpha
Helix 5
AA5
A
201 206Right-handed alpha
Helix 6
AA6
A
214 217Right-handed 310
Helix 7
AA7
A
266 278Right-handed alpha
Helix 8
AA8
A
280 288Right-handed 310
Helix 9
AA9
A
293 297Right-handed 310
Helix 10
AB1
A
299 309Right-handed alpha
Helix 11
AB2
A
321 328Right-handed alpha
Helix 12
AB3
A
331 344Right-handed alpha
Helix 13
AB4
A
348 352Right-handed 310
Helix 14
AB5
A
359 363Right-handed 310
Helix 15
AB6
A
365 382Right-handed alpha
Helix 16
AB7
B
33 48Right-handed alpha
Helix 17
AB8
B
49 82Right-handed alpha
Helix 18
AB9
B
85 112Right-handed alpha
Helix 19
AC1
B
112 141Right-handed alpha
Helix 20
AC2
B
201 206Right-handed alpha
Helix 21
AC3
B
214 217Right-handed 310
Helix 22
AC4
B
266 278Right-handed alpha
Helix 23
AC5
B
284 288Right-handed 310
Helix 24
AC6
B
293 297Right-handed 310
Helix 25
AC7
B
299 308Right-handed alpha
Helix 26
AC8
B
323 328Right-handed alpha
Helix 27
AC9
B
331 344Right-handed alpha
Helix 28
AD1
B
359 363Right-handed 310
Helix 29
AD2
B
365 383Right-handed alpha
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There are 8 sheets in PDB entry 7P56. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 32first strand
Strand 2
A
207 212anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
142 144first strand
Strand 2
A
147 148anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
161 162first strand
Strand 2
A
165 166anti-parallel
Strand 3
A
169 170anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
234 236first strand
Strand 2
A
241 243anti-parallel
Strand 3
A
251 252anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
30 32first strand
Strand 2
B
207 212anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
142 144first strand
Strand 2
B
147 148anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
161 162first strand
Strand 2
B
165 166anti-parallel
Strand 3
B
169 170anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
234 236first strand
Strand 2
B
241 243anti-parallel
Strand 3
B
251 252anti-parallel
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