Analysis of interatomic Contacts of Structural Units in PDB entry:
7P57


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7P57 entry

There is 1 chain in PDB entry 7P57 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 27GLU 385
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 15 helices in PDB entry 7P57. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
33 48Right-handed alpha
Helix 2
AA2
A
49 82Right-handed alpha
Helix 3
AA3
A
85 112Right-handed alpha
Helix 4
AA4
A
112 141Right-handed alpha
Helix 5
AA5
A
201 206Right-handed alpha
Helix 6
AA6
A
214 217Right-handed 310
Helix 7
AA7
A
266 278Right-handed alpha
Helix 8
AA8
A
284 288Right-handed 310
Helix 9
AA9
A
293 297Right-handed 310
Helix 10
AB1
A
299 308Right-handed alpha
Helix 11
AB2
A
315 328Right-handed alpha
Helix 12
AB3
A
331 345Right-handed alpha
Helix 13
AB4
A
348 352Right-handed 310
Helix 14
AB5
A
359 363Right-handed 310
Helix 15
AB6
A
365 385Right-handed alpha
Back to top of page

There are 3 sheets in PDB entry 7P57. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 32first strand
Strand 2
A
207 212anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
161 162first strand
Strand 2
A
165 166anti-parallel
Strand 3
A
169 170anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
234 236first strand
Strand 2
A
241 243anti-parallel
Strand 3
A
251 252anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il