Analysis of interatomic Contacts of Structural Units in PDB entry:
7P5M


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7P5M entry

There are 2 chains in PDB entry 7P5M (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 6HIS 416
B
 VAL 6HIS 416
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 7P5M. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 18Right-handed alpha
Helix 2
AA2
A
38 70Right-handed alpha
Helix 3
AA3
A
89 159Right-handed alpha
Helix 4
AA4
A
160 164Right-handed 310
Helix 5
AA5
A
167 187Right-handed alpha
Helix 6
AA6
A
191 237Right-handed alpha
Helix 7
AA7
A
238 276Right-handed alpha
Helix 8
AA8
A
276 285Right-handed alpha
Helix 9
AA9
A
290 300Right-handed alpha
Helix 10
AB1
A
308 337Right-handed alpha
Helix 11
AB2
A
341 365Right-handed alpha
Helix 12
AB3
A
366 382Right-handed alpha
Helix 13
AB4
A
383 414Right-handed alpha
Helix 14
AB5
B
11 19Right-handed alpha
Helix 15
AB6
B
38 70Right-handed alpha
Helix 16
AB7
B
89 159Right-handed alpha
Helix 17
AB8
B
160 164Right-handed 310
Helix 18
AB9
B
167 187Right-handed alpha
Helix 19
AC1
B
191 237Right-handed alpha
Helix 20
AC2
B
238 276Right-handed alpha
Helix 21
AC3
B
276 285Right-handed alpha
Helix 22
AC4
B
290 300Right-handed alpha
Helix 23
AC5
B
308 337Right-handed alpha
Helix 24
AC6
B
341 365Right-handed alpha
Helix 25
AC7
B
366 383Right-handed alpha
Helix 26
AC8
B
383 409Right-handed alpha
Helix 27
AC9
B
409 414Right-handed alpha
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There are no sheets in PDB entry 7P5M
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il