Analysis of interatomic Contacts of Structural Units in PDB entry:
7P5O

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7P5O entry

There are 2 chains in PDB entry 7P5O (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU -2	THR 555
B	LEU -2	THR 555

There are 51 helices in PDB entry 7P5O. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	25	30	Right-handed alpha
Helix 2	AA2	A	32	43	Right-handed alpha
Helix 3	AA3	A	63	78	Right-handed alpha
Helix 4	AA4	A	88	90	Right-handed 310
Helix 5	AA5	A	92	103	Right-handed alpha
Helix 6	AA6	A	137	151	Right-handed alpha
Helix 7	AA7	A	183	194	Right-handed alpha
Helix 8	AA8	A	195	206	Right-handed alpha
Helix 9	AA9	A	220	229	Right-handed alpha
Helix 10	AB1	A	235	237	Right-handed 310
Helix 11	AB2	A	247	251	Right-handed 310
Helix 12	AB3	A	260	270	Right-handed alpha
Helix 13	AB4	A	295	306	Right-handed alpha
Helix 14	AB5	A	307	309	Right-handed 310
Helix 15	AB6	A	310	317	Right-handed alpha
Helix 16	AB7	A	329	338	Right-handed alpha
Helix 17	AB8	A	348	351	Right-handed 310
Helix 18	AB9	A	352	358	Right-handed alpha
Helix 19	AC1	A	380	399	Right-handed alpha
Helix 20	AC2	A	405	418	Right-handed alpha
Helix 21	AC3	A	431	447	Right-handed alpha
Helix 22	AC4	A	517	521	Right-handed 310
Helix 23	AC5	A	524	529	Right-handed alpha
Helix 24	AC6	A	529	541	Right-handed alpha
Helix 25	AC7	A	541	547	Right-handed alpha
Helix 26	AC8	B	25	30	Right-handed alpha
Helix 27	AC9	B	32	43	Right-handed alpha
Helix 28	AD1	B	63	78	Right-handed alpha
Helix 29	AD2	B	88	90	Right-handed 310
Helix 30	AD3	B	92	104	Right-handed alpha
Helix 31	AD4	B	137	151	Right-handed alpha
Helix 32	AD5	B	183	194	Right-handed alpha
Helix 33	AD6	B	197	206	Right-handed alpha
Helix 34	AD7	B	220	229	Right-handed alpha
Helix 35	AD8	B	235	237	Right-handed 310
Helix 36	AD9	B	247	251	Right-handed 310
Helix 37	AE1	B	260	270	Right-handed alpha
Helix 38	AE2	B	295	306	Right-handed alpha
Helix 39	AE3	B	307	309	Right-handed 310
Helix 40	AE4	B	310	317	Right-handed alpha
Helix 41	AE5	B	329	338	Right-handed alpha
Helix 42	AE6	B	348	351	Right-handed 310
Helix 43	AE7	B	352	358	Right-handed alpha
Helix 44	AE8	B	380	399	Right-handed alpha
Helix 45	AE9	B	405	418	Right-handed alpha
Helix 46	AF1	B	431	448	Right-handed alpha
Helix 47	AF2	B	448	453	Right-handed alpha
Helix 48	AF3	B	517	521	Right-handed 310
Helix 49	AF4	B	524	529	Right-handed alpha
Helix 50	AF5	B	529	541	Right-handed alpha
Helix 51	AF6	B	541	547	Right-handed alpha

There are 12 sheets in PDB entry 7P5O. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	3	7	first strand
Strand 2	A	153	157	anti-parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	21	24	first strand
Strand 2	A	123	129	anti-parallel
Strand 3	A	107	111	anti-parallel
Strand 4	A	53	58	parallel
Strand 5	A	82	86	parallel
Strand 6	A	175	180	parallel
Strand 7	A	168	172	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	239	240	first strand
Strand 2	A	211	214	parallel
Strand 3	A	274	278	parallel
Strand 4	A	285	289	anti-parallel
Strand 5	A	292	294	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	342	345	first strand
Strand 2	A	321	324	parallel
Strand 3	A	363	366	parallel
Strand 4	A	370	373	anti-parallel

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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	456	457	first strand
Strand 2	A	460	467	anti-parallel
Strand 3	A	483	487	anti-parallel
Strand 4	A	492	497	anti-parallel
Strand 5	A	505	515	anti-parallel
Strand 6	A	419	430	anti-parallel
Strand 7	A	553	555	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	470	471	first strand
Strand 2	A	477	478	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	3	7	first strand
Strand 2	B	153	157	anti-parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	21	24	first strand
Strand 2	B	123	129	anti-parallel
Strand 3	B	107	111	anti-parallel
Strand 4	B	53	58	parallel
Strand 5	B	82	86	parallel
Strand 6	B	175	180	parallel
Strand 7	B	168	172	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	239	240	first strand
Strand 2	B	211	214	parallel
Strand 3	B	274	278	parallel
Strand 4	B	285	289	anti-parallel
Strand 5	B	292	294	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	342	345	first strand
Strand 2	B	321	324	parallel
Strand 3	B	363	366	parallel
Strand 4	B	370	373	anti-parallel

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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	456	457	first strand
Strand 2	B	460	467	anti-parallel
Strand 3	B	483	487	anti-parallel
Strand 4	B	492	497	anti-parallel
Strand 5	B	505	515	anti-parallel
Strand 6	B	419	430	anti-parallel
Strand 7	B	553	555	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	470	471	first strand
Strand 2	B	477	478	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7P5O

Analysis of interatomic Contacts of Structural Units in PDB entry:
7P5O