Analysis of interatomic Contacts of Structural Units in PDB entry:
7P6L

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7P6L entry

There are 3 chains in PDB entry 7P6L (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	GLU 7	ASP 464
A	GLU 7	ASP 464
C	GLU 7	ILE 347

There are102 helices in PDB entry 7P6L. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	22	26	Right-handed 310
Helix 2	AA2	B	30	43	Right-handed alpha
Helix 3	AA3	B	60	68	Right-handed alpha
Helix 4	AA4	B	78	89	Right-handed alpha
Helix 5	AA5	B	99	110	Right-handed alpha
Helix 6	AA6	B	111	113	Right-handed 310
Helix 7	AA7	B	114	121	Right-handed alpha
Helix 8	AA8	B	121	140	Right-handed alpha
Helix 9	AA9	B	147	165	Right-handed alpha
Helix 10	AB1	B	169	173	Right-handed 310
Helix 11	AB2	B	177	196	Right-handed alpha
Helix 12	AB3	B	197	203	Right-handed 310
Helix 13	AB4	B	204	232	Right-handed alpha
Helix 14	AB5	B	238	246	Right-handed alpha
Helix 15	AB6	B	256	271	Right-handed alpha
Helix 16	AB7	B	272	289	Right-handed alpha
Helix 17	AB8	B	289	304	Right-handed alpha
Helix 18	AB9	B	310	316	Right-handed 310
Helix 19	AC1	B	317	331	Right-handed alpha
Helix 20	AC2	B	363	367	Right-handed alpha
Helix 21	AC3	B	369	374	Right-handed alpha
Helix 22	AC4	B	381	385	Right-handed 310
Helix 23	AC5	B	386	397	Right-handed alpha
Helix 24	AC6	B	406	410	Right-handed 310
Helix 25	AC7	B	413	431	Right-handed alpha
Helix 26	AC8	A	22	26	Right-handed 310
Helix 27	AC9	A	30	43	Right-handed alpha
Helix 28	AD1	A	60	68	Right-handed alpha
Helix 29	AD2	A	78	89	Right-handed alpha
Helix 30	AD3	A	99	110	Right-handed alpha
Helix 31	AD4	A	111	113	Right-handed 310
Helix 32	AD5	A	114	121	Right-handed alpha
Helix 33	AD6	A	121	140	Right-handed alpha
Helix 34	AD7	A	147	165	Right-handed alpha
Helix 35	AD8	A	169	173	Right-handed 310
Helix 36	AD9	A	177	196	Right-handed alpha
Helix 37	AE1	A	197	202	Right-handed alpha
Helix 38	AE2	A	204	232	Right-handed alpha
Helix 39	AE3	A	238	246	Right-handed alpha
Helix 40	AE4	A	256	271	Right-handed alpha
Helix 41	AE5	A	272	289	Right-handed alpha
Helix 42	AE6	A	289	304	Right-handed alpha
Helix 43	AE7	A	310	316	Right-handed 310
Helix 44	AE8	A	317	331	Right-handed alpha
Helix 45	AE9	A	363	367	Right-handed alpha
Helix 46	AF1	A	369	374	Right-handed alpha
Helix 47	AF2	A	375	377	Right-handed 310
Helix 48	AF3	A	381	385	Right-handed 310
Helix 49	AF4	A	386	397	Right-handed alpha
Helix 50	AF5	A	406	410	Right-handed 310
Helix 51	AF6	A	413	431	Right-handed alpha
Helix 52	AF7	C	22	27	Right-handed 310
Helix 53	AF8	C	30	43	Right-handed alpha
Helix 54	AF9	C	60	68	Right-handed alpha
Helix 55	AG1	C	78	89	Right-handed alpha
Helix 56	AG2	C	99	110	Right-handed alpha
Helix 57	AG3	C	111	113	Right-handed 310
Helix 58	AG4	C	114	121	Right-handed alpha
Helix 59	AG5	C	121	140	Right-handed alpha
Helix 60	AG6	C	147	165	Right-handed alpha
Helix 61	AG7	C	169	173	Right-handed 310
Helix 62	AG8	C	177	196	Right-handed alpha
Helix 63	AG9	C	204	232	Right-handed alpha
Helix 64	AH1	C	238	246	Right-handed alpha
Helix 65	AH2	C	256	271	Right-handed alpha
Helix 66	AH3	C	272	289	Right-handed alpha
Helix 67	AH4	C	289	304	Right-handed alpha
Helix 68	AH5	C	310	316	Right-handed 310
Helix 69	AH6	C	317	331	Right-handed alpha
Helix 70	AH7	C	363	367	Right-handed alpha
Helix 71	AH8	C	369	374	Right-handed alpha
Helix 72	AH9	C	375	377	Right-handed 310
Helix 73	AI1	C	381	385	Right-handed 310
Helix 74	AI2	C	386	397	Right-handed alpha
Helix 75	AI3	C	406	410	Right-handed 310
Helix 76	AI4	C	413	431	Right-handed alpha
Helix 77	AI5	D	22	26	Right-handed 310
Helix 78	AI6	D	30	43	Right-handed alpha
Helix 79	AI7	D	60	68	Right-handed alpha
Helix 80	AI8	D	78	89	Right-handed alpha
Helix 81	AI9	D	99	110	Right-handed alpha
Helix 82	AJ1	D	111	113	Right-handed 310
Helix 83	AJ2	D	114	121	Right-handed alpha
Helix 84	AJ3	D	121	140	Right-handed alpha
Helix 85	AJ4	D	147	165	Right-handed alpha
Helix 86	AJ5	D	169	173	Right-handed 310
Helix 87	AJ6	D	177	196	Right-handed alpha
Helix 88	AJ7	D	197	203	Right-handed 310
Helix 89	AJ8	D	204	232	Right-handed alpha
Helix 90	AJ9	D	238	246	Right-handed alpha
Helix 91	AK1	D	256	271	Right-handed alpha
Helix 92	AK2	D	272	289	Right-handed alpha
Helix 93	AK3	D	289	304	Right-handed alpha
Helix 94	AK4	D	310	316	Right-handed 310
Helix 95	AK5	D	317	331	Right-handed alpha
Helix 96	AK6	D	363	367	Right-handed alpha
Helix 97	AK7	D	369	374	Right-handed alpha
Helix 98	AK8	D	375	377	Right-handed 310
Helix 99	AK9	D	381	385	Right-handed 310
Helix 100	AL1	D	386	397	Right-handed alpha
Helix 101	AL2	D	406	410	Right-handed 310
Helix 102	AL3	D	413	431	Right-handed alpha

There are 16 sheets in PDB entry 7P6L. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	45	50	first strand
Strand 2	B	53	58	anti-parallel
Strand 3	B	358	362	parallel
Strand 4	B	336	341	anti-parallel
Strand 5	B	73	74	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	145	146	first strand
Strand 2	B	457	462	anti-parallel
Strand 3	B	432	436	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	345	347	first strand
Strand 2	B	351	353	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	445	447	first strand
Strand 2	B	451	453	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	45	50	first strand
Strand 2	A	53	58	anti-parallel
Strand 3	A	358	362	parallel
Strand 4	A	336	341	anti-parallel
Strand 5	A	73	74	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	145	146	first strand
Strand 2	A	457	462	anti-parallel
Strand 3	A	432	436	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	345	347	first strand
Strand 2	A	351	353	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	445	447	first strand
Strand 2	A	451	453	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	45	50	first strand
Strand 2	C	53	58	anti-parallel
Strand 3	C	358	362	parallel
Strand 4	C	336	341	anti-parallel
Strand 5	C	73	74	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	145	146	first strand
Strand 2	C	457	462	anti-parallel
Strand 3	C	432	436	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	345	347	first strand
Strand 2	C	351	353	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	445	447	first strand
Strand 2	C	451	453	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	45	50	first strand
Strand 2	D	53	58	anti-parallel
Strand 3	D	358	362	parallel
Strand 4	D	336	341	anti-parallel
Strand 5	D	73	74	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	145	146	first strand
Strand 2	D	457	462	anti-parallel
Strand 3	D	432	436	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	345	347	first strand
Strand 2	D	351	353	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	445	447	first strand
Strand 2	D	451	453	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7P6L

Analysis of interatomic Contacts of Structural Units in PDB entry:
7P6L