Analysis of interatomic Contacts of Structural Units in PDB entry:
7P72


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7P72 entry

There are 2 chains in PDB entry 7P72 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 38ASP 460
B
 PRO 77VAL 82
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 7P72. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
88 94Right-handed alpha
Helix 2
AA2
A
113 124Right-handed alpha
Helix 3
AA3
A
155 169Right-handed alpha
Helix 4
AA4
A
173 182Right-handed alpha
Helix 5
AA5
A
185 201Right-handed alpha
Helix 6
AA6
A
203 212Right-handed alpha
Helix 7
AA7
A
213 225Right-handed alpha
Helix 8
AA8
A
226 240Right-handed alpha
Helix 9
AA9
A
245 256Right-handed alpha
Helix 10
AB1
A
257 273Right-handed alpha
Helix 11
AB2
A
275 284Right-handed alpha
Helix 12
AB3
A
285 297Right-handed alpha
Helix 13
AB4
A
308 323Right-handed alpha
Helix 14
AB5
A
330 341Right-handed alpha
Helix 15
AB6
A
342 357Right-handed alpha
Helix 16
AB7
A
360 369Right-handed alpha
Helix 17
AB8
A
370 386Right-handed alpha
Helix 18
AB9
A
386 401Right-handed alpha
Helix 19
AC1
A
405 416Right-handed alpha
Helix 20
AC2
A
420 433Right-handed alpha
Helix 21
AC3
A
435 444Right-handed alpha
Helix 22
AC4
A
445 457Right-handed alpha
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There are 2 sheets in PDB entry 7P72. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
42 46first strand
Strand 2
A
128 133anti-parallel
Strand 3
A
100 104anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
80 84first strand
Strand 2
A
55 58anti-parallel
Strand 3
B
79 82anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il