Analysis of interatomic Contacts of Structural Units in PDB entry:
7P80

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7P80 entry

There are 11 chains in PDB entry 7P80 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ILE 19	HIS 191
B	ASP 18	HIS 191
C	ILE 19	HIS 191
D	ILE 19	THR 190
E	ILE 19	HIS 191
F	ILE 19	THR 190
G	ILE 19	HIS 191
I	SER 3	PRO 4
I	ALA 6	ALA 6
J	SER 3	PRO 4
J	ALA 6	ALA 6

There are 49 helices in PDB entry 7P80. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	20	26	Right-handed alpha
Helix 2	AA2	A	36	54	Right-handed alpha
Helix 3	AA3	A	69	83	Right-handed alpha
Helix 4	AA4	A	97	105	Right-handed alpha
Helix 5	AA5	A	139	158	Right-handed alpha
Helix 6	AA6	A	160	168	Right-handed alpha
Helix 7	AA7	A	176	183	Right-handed alpha
Helix 8	AA8	B	19	26	Right-handed alpha
Helix 9	AA9	B	36	54	Right-handed alpha
Helix 10	AB1	B	69	83	Right-handed alpha
Helix 11	AB2	B	97	105	Right-handed alpha
Helix 12	AB3	B	138	158	Right-handed alpha
Helix 13	AB4	B	160	168	Right-handed alpha
Helix 14	AB5	B	176	183	Right-handed alpha
Helix 15	AB6	C	20	26	Right-handed alpha
Helix 16	AB7	C	36	54	Right-handed alpha
Helix 17	AB8	C	69	83	Right-handed alpha
Helix 18	AB9	C	97	105	Right-handed alpha
Helix 19	AC1	C	138	158	Right-handed alpha
Helix 20	AC2	C	160	168	Right-handed alpha
Helix 21	AC3	C	176	181	Right-handed alpha
Helix 22	AC4	D	20	26	Right-handed alpha
Helix 23	AC5	D	36	54	Right-handed alpha
Helix 24	AC6	D	69	83	Right-handed alpha
Helix 25	AC7	D	97	105	Right-handed alpha
Helix 26	AC8	D	139	158	Right-handed alpha
Helix 27	AC9	D	160	168	Right-handed alpha
Helix 28	AD1	D	176	183	Right-handed alpha
Helix 29	AD2	E	20	26	Right-handed alpha
Helix 30	AD3	E	36	54	Right-handed alpha
Helix 31	AD4	E	69	83	Right-handed alpha
Helix 32	AD5	E	97	105	Right-handed alpha
Helix 33	AD6	E	138	158	Right-handed alpha
Helix 34	AD7	E	160	168	Right-handed alpha
Helix 35	AD8	E	175	183	Right-handed alpha
Helix 36	AD9	F	20	26	Right-handed alpha
Helix 37	AE1	F	36	54	Right-handed alpha
Helix 38	AE2	F	69	83	Right-handed alpha
Helix 39	AE3	F	97	105	Right-handed alpha
Helix 40	AE4	F	138	158	Right-handed alpha
Helix 41	AE5	F	160	169	Right-handed alpha
Helix 42	AE6	F	176	183	Right-handed alpha
Helix 43	AE7	G	20	24	Right-handed alpha
Helix 44	AE8	G	36	54	Right-handed alpha
Helix 45	AE9	G	69	83	Right-handed alpha
Helix 46	AF1	G	97	105	Right-handed alpha
Helix 47	AF2	G	139	158	Right-handed alpha
Helix 48	AF3	G	160	169	Right-handed alpha
Helix 49	AF4	G	176	183	Right-handed alpha

There are 14 sheets in PDB entry 7P80. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	28	31	first strand
Strand 2	A	59	65	parallel
Strand 3	A	87	96	parallel
Strand 4	A	118	120	parallel
Strand 5	A	174	175	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	28	31	first strand
Strand 2	A	59	65	parallel
Strand 3	A	87	96	parallel
Strand 4	A	111	113	parallel
Strand 5	A	187	188	parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	28	31	first strand
Strand 2	B	59	65	parallel
Strand 3	B	87	96	parallel
Strand 4	B	118	120	parallel
Strand 5	B	174	175	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	28	31	first strand
Strand 2	B	59	65	parallel
Strand 3	B	87	96	parallel
Strand 4	B	111	113	parallel
Strand 5	B	187	188	parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	28	31	first strand
Strand 2	C	59	65	parallel
Strand 3	C	87	96	parallel
Strand 4	C	118	120	parallel
Strand 5	C	174	175	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	28	31	first strand
Strand 2	C	59	65	parallel
Strand 3	C	87	96	parallel
Strand 4	C	111	113	parallel
Strand 5	C	187	188	parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	28	31	first strand
Strand 2	D	59	65	parallel
Strand 3	D	87	96	parallel
Strand 4	D	118	120	parallel
Strand 5	D	174	175	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	28	31	first strand
Strand 2	D	59	65	parallel
Strand 3	D	87	96	parallel
Strand 4	D	111	113	parallel
Strand 5	D	187	188	parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	28	31	first strand
Strand 2	E	59	65	parallel
Strand 3	E	87	96	parallel
Strand 4	E	118	120	parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	28	31	first strand
Strand 2	E	59	65	parallel
Strand 3	E	87	96	parallel
Strand 4	E	111	113	parallel
Strand 5	E	187	188	parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	28	31	first strand
Strand 2	F	59	65	parallel
Strand 3	F	87	96	parallel
Strand 4	F	118	120	parallel
Strand 5	F	174	175	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	28	31	first strand
Strand 2	F	59	65	parallel
Strand 3	F	87	96	parallel
Strand 4	F	111	113	parallel
Strand 5	F	187	188	parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	28	31	first strand
Strand 2	G	59	65	parallel
Strand 3	G	87	96	parallel
Strand 4	G	118	120	parallel
Strand 5	G	174	175	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	28	31	first strand
Strand 2	G	59	65	parallel
Strand 3	G	87	96	parallel
Strand 4	G	111	113	parallel
Strand 5	G	187	188	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7P80

Analysis of interatomic Contacts of Structural Units in PDB entry:
7P80