Analysis of interatomic Contacts of Structural Units in PDB entry:
7P82


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7P82 entry

There are 2 chains in PDB entry 7P82 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 2PHE 406
C
 SER -1PHE 406
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 7P82. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
13 17Right-handed 310
Helix 2
AA2
A
29 54Right-handed alpha
Helix 3
AA3
A
108 125Right-handed alpha
Helix 4
AA4
A
144 154Right-handed alpha
Helix 5
AA5
A
174 188Right-handed alpha
Helix 6
AA6
A
189 196Right-handed alpha
Helix 7
AA7
A
225 227Right-handed 310
Helix 8
AA8
A
229 252Right-handed alpha
Helix 9
AA9
A
279 284Right-handed 310
Helix 10
AB1
A
318 337Right-handed alpha
Helix 11
AB2
A
372 390Right-handed alpha
Helix 12
AB3
A
391 400Right-handed alpha
Helix 13
AB4
C
13 17Right-handed 310
Helix 14
AB5
C
29 54Right-handed alpha
Helix 15
AB6
C
108 125Right-handed alpha
Helix 16
AB7
C
147 154Right-handed alpha
Helix 17
AB8
C
174 188Right-handed alpha
Helix 18
AB9
C
189 196Right-handed alpha
Helix 19
AC1
C
225 227Right-handed 310
Helix 20
AC2
C
229 252Right-handed alpha
Helix 21
AC3
C
279 283Right-handed 310
Helix 22
AC4
C
318 335Right-handed alpha
Helix 23
AC5
C
372 390Right-handed alpha
Helix 24
AC6
C
390 400Right-handed alpha
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There are 12 sheets in PDB entry 7P82. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 8first strand
Strand 2
A
360 367parallel
Strand 3
A
340 348anti-parallel
Strand 4
A
166 171anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
19 25first strand
Strand 2
A
199 210anti-parallel
Strand 3
A
213 223anti-parallel
Strand 4
A
256 261parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
19 25first strand
Strand 2
A
199 210anti-parallel
Strand 3
A
213 223anti-parallel
Strand 4
A
274 275parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
134 138first strand
Strand 2
A
84 92parallel
Strand 3
A
59 67anti-parallel
Strand 4
A
287 288anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
70 72first strand
Strand 2
A
79 82anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
95 98first strand
Strand 2
A
103 106anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
4 8first strand
Strand 2
C
360 367parallel
Strand 3
C
340 348anti-parallel
Strand 4
C
166 171anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
19 25first strand
Strand 2
C
199 210anti-parallel
Strand 3
C
213 223anti-parallel
Strand 4
C
256 261parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
19 25first strand
Strand 2
C
199 210anti-parallel
Strand 3
C
213 223anti-parallel
Strand 4
C
274 275parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
103 106first strand
Strand 2
C
84 98anti-parallel
Strand 3
C
141 146parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
134 138first strand
Strand 2
C
84 98parallel
Strand 3
C
59 67anti-parallel
Strand 4
C
287 288anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
70 72first strand
Strand 2
C
79 82anti-parallel
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