Analysis of interatomic Contacts of Structural Units in PDB entry:
7P8H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7P8H entry

There are 2 chains in PDB entry 7P8H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 3TYR 140
C
 ALA 3TYR 140
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 2 helices in PDB entry 7P8H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
114 116Right-handed 310
Helix 2
AA2
C
114 116Right-handed 310
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There are 3 sheets in PDB entry 7P8H. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 12 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
67 68first strand
Strand 2
A
57 64anti-parallel
Strand 3
A
44 52anti-parallel
Strand 4
A
33 39anti-parallel
Strand 5
A
118 125anti-parallel
Strand 6
A
4 9anti-parallel
Strand 7
C
4 9anti-parallel
Strand 8
C
118 125anti-parallel
Strand 9
C
33 39anti-parallel
Strand 10
C
44 52anti-parallel
Strand 11
C
57 64anti-parallel
Strand 12
C
67 68anti-parallel
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There are 12 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
72 74first strand
Strand 2
A
57 64anti-parallel
Strand 3
A
44 52anti-parallel
Strand 4
A
33 39anti-parallel
Strand 5
A
118 125anti-parallel
Strand 6
A
4 9anti-parallel
Strand 7
C
4 9anti-parallel
Strand 8
C
118 125anti-parallel
Strand 9
C
33 39anti-parallel
Strand 10
C
44 52anti-parallel
Strand 11
C
57 64anti-parallel
Strand 12
C
72 73anti-parallel
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There are 10 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
103 109first strand
Strand 2
A
95 100anti-parallel
Strand 3
A
85 91anti-parallel
Strand 4
A
18 25anti-parallel
Strand 5
A
128 136anti-parallel
Strand 6
C
128 136anti-parallel
Strand 7
C
18 25anti-parallel
Strand 8
C
85 91anti-parallel
Strand 9
C
95 100anti-parallel
Strand 10
C
103 109anti-parallel
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