Analysis of interatomic Contacts of Structural Units in PDB entry:
7P99


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7P99 entry

There are 2 chains in PDB entry 7P99 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 225ILE 501
C
 HIS 17TYR 95
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 7P99. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
235 247Right-handed alpha
Helix 2
AA2
A
248 257Right-handed alpha
Helix 3
AA3
A
260 263Right-handed 310
Helix 4
AA4
A
264 284Right-handed alpha
Helix 5
AA5
A
297 324Right-handed alpha
Helix 6
AA6
A
332 343Right-handed alpha
Helix 7
AA7
A
344 349Right-handed alpha
Helix 8
AA8
A
387 390Right-handed 310
Helix 9
AA9
A
430 435Right-handed 310
Helix 10
AB1
A
453 455Right-handed 310
Helix 11
AB2
A
488 490Right-handed 310
Helix 12
AB3
C
40 52Right-handed alpha
Helix 13
AB4
C
54 56Right-handed 310
Helix 14
AB5
C
72 77Right-handed alpha
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There are 4 sheets in PDB entry 7P99. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
367 374first strand
Strand 2
A
353 360anti-parallel
Strand 3
A
405 413anti-parallel
Strand 4
A
391 395anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
377 379first strand
Strand 2
A
417 422parallel
Strand 3
A
492 500anti-parallel
Strand 4
A
441 452anti-parallel
Strand 5
A
436 438anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
377 379first strand
Strand 2
A
417 422parallel
Strand 3
A
492 500anti-parallel
Strand 4
A
441 452anti-parallel
Strand 5
A
456 462anti-parallel
Strand 6
A
468 471anti-parallel
Strand 7
A
480 482anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
29 34first strand
Strand 2
C
18 23anti-parallel
Strand 3
C
82 88parallel
Strand 4
C
58 62anti-parallel
Strand 5
C
65 66anti-parallel
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