Analysis of interatomic Contacts of Structural Units in PDB entry:
7P9V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7P9V entry

There are 2 chains in PDB entry 7P9V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 168ALA 631
B
 THR 45ASP 499
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 44 helices in PDB entry 7P9V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
168 175Right-handed alpha
Helix 2
AA2
A
179 208Right-handed alpha
Helix 3
AA3
A
230 236Right-handed alpha
Helix 4
AA4
A
242 247Right-handed 310
Helix 5
AA5
A
248 255Right-handed alpha
Helix 6
AA6
A
283 286Right-handed 310
Helix 7
AA7
A
287 301Right-handed alpha
Helix 8
AA8
A
326 342Right-handed alpha
Helix 9
AA9
A
356 372Right-handed alpha
Helix 10
AB1
A
385 393Right-handed alpha
Helix 11
AB2
A
405 407Right-handed 310
Helix 12
AB3
A
414 427Right-handed alpha
Helix 13
AB4
A
447 449Right-handed 310
Helix 14
AB5
A
450 461Right-handed alpha
Helix 15
AB6
A
510 515Right-handed alpha
Helix 16
AB7
A
519 534Right-handed alpha
Helix 17
AB8
A
534 540Right-handed alpha
Helix 18
AB9
A
585 589Right-handed 310
Helix 19
AC1
B
46 58Right-handed alpha
Helix 20
AC2
B
60 72Right-handed alpha
Helix 21
AC3
B
76 105Right-handed alpha
Helix 22
AC4
B
111 116Right-handed alpha
Helix 23
AC5
B
119 133Right-handed alpha
Helix 24
AC6
B
133 152Right-handed alpha
Helix 25
AC7
B
161 183Right-handed alpha
Helix 26
AC8
B
184 211Right-handed alpha
Helix 27
AC9
B
231 233Right-handed 310
Helix 28
AD1
B
234 246Right-handed alpha
Helix 29
AD2
B
270 292Right-handed alpha
Helix 30
AD3
B
293 300Right-handed alpha
Helix 31
AD4
B
302 312Right-handed alpha
Helix 32
AD5
B
314 332Right-handed alpha
Helix 33
AD6
B
333 335Right-handed 310
Helix 34
AD7
B
336 348Right-handed alpha
Helix 35
AD8
B
352 355Right-handed 310
Helix 36
AD9
B
365 370Right-handed alpha
Helix 37
AE1
B
371 382Right-handed alpha
Helix 38
AE2
B
384 402Right-handed alpha
Helix 39
AE3
B
403 411Right-handed alpha
Helix 40
AE4
B
427 439Right-handed alpha
Helix 41
AE5
B
440 443Right-handed 310
Helix 42
AE6
B
450 460Right-handed alpha
Helix 43
AE7
B
461 466Right-handed 310
Helix 44
AE8
B
477 492Right-handed alpha
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There are 5 sheets in PDB entry 7P9V. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
400 403first strand
Strand 2
A
377 381parallel
Strand 3
A
346 347parallel
Strand 4
A
304 308parallel
Strand 5
A
259 262parallel
Strand 6
A
225 228parallel
Strand 7
A
464 467parallel
Strand 8
A
433 434parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
266 268first strand
Strand 2
A
276 281anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
541 545first strand
Strand 2
A
553 557anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
609 611first strand
Strand 2
A
593 599anti-parallel
Strand 3
A
623 626anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
357 359first strand
Strand 2
B
494 496anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il