Analysis of interatomic Contacts of Structural Units in PDB entry:
7PAU

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7PAU entry

There are 32 chains in PDB entry 7PAU (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
0	MET 1	GLU 47
1	MET 1	ILE 59
2	MET 1	GLY 37
7	MET 1	LEU 182
a	PRO 2	GLN 286
b	MET 1	ALA 229
c	ALA 2	PHE 211
d	ASN 3	LEU 177
e	LYS 3	LYS 178
f	MET 1	ASP 145
g	ALA 3	LYS 128
h	ILE 9	ILE 136
i	LYS 3	SER 146
j	MET 1	VAL 122
k	LEU 3	GLU 150
l	MET 1	GLU 136
m	SER 2	ASP 120
n	MET 1	PHE 116
o	LYS 3	ARG 117
p	MET 1	SER 114
q	MET 1	HIS 99
r	MET 1	ARG 139
s	ASP 2	VAL 93
t	MET 1	LEU 111
u	SER 17	LEU 102
v	ALA 2	LEU 64
w	THR 2	SER 109
x	PHE 5	GLY 48
y	ALA 2	TYR 57
z	ALA 2	LYS 51
3	A 8	U 2900
4	U 1	C 108

There are 93 helices in PDB entry 7PAU. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	0	8	16	Right-handed alpha
Helix 2	AA2	0	17	23	Right-handed alpha
Helix 3	AA3	0	24	38	Right-handed alpha
Helix 4	AA4	1	4	9	Right-handed alpha
Helix 5	AA5	1	34	42	Right-handed alpha
Helix 6	AA6	1	48	53	Right-handed alpha
Helix 7	AA7	2	29	33	Right-handed 310
Helix 8	AA8	7	2	28	Right-handed alpha
Helix 9	AA9	7	34	40	Right-handed alpha
Helix 10	AB1	7	76	85	Right-handed alpha
Helix 11	AB2	7	108	145	Right-handed alpha
Helix 12	AB3	7	148	182	Right-handed alpha
Helix 13	AB4	a	34	36	Right-handed 310
Helix 14	AB5	a	139	141	Right-handed 310
Helix 15	AB6	a	205	211	Right-handed 310
Helix 16	AB7	a	215	221	Right-handed alpha
Helix 17	AB8	a	272	276	Right-handed 310
Helix 18	AB9	b	63	73	Right-handed alpha
Helix 19	AC1	b	97	101	Right-handed 310
Helix 20	AC2	b	121	126	Right-handed alpha
Helix 21	AC3	c	31	43	Right-handed alpha
Helix 22	AC4	c	104	121	Right-handed alpha
Helix 23	AC5	c	139	151	Right-handed alpha
Helix 24	AC6	c	152	155	Right-handed 310
Helix 25	AC7	c	165	171	Right-handed alpha
Helix 26	AC8	c	187	194	Right-handed alpha
Helix 27	AC9	c	202	211	Right-handed alpha
Helix 28	AD1	d	4	20	Right-handed alpha
Helix 29	AD2	d	24	28	Right-handed 310
Helix 30	AD3	d	50	61	Right-handed alpha
Helix 31	AD4	d	92	105	Right-handed alpha
Helix 32	AD5	d	106	111	Right-handed alpha
Helix 33	AD6	d	162	173	Right-handed alpha
Helix 34	AD7	e	61	85	Right-handed alpha
Helix 35	AD8	e	140	153	Right-handed alpha
Helix 36	AD9	f	26	30	Right-handed 310
Helix 37	AE1	f	47	75	Right-handed alpha
Helix 38	AE2	f	94	105	Right-handed alpha
Helix 39	AE3	f	109	113	Right-handed 310
Helix 40	AE4	g	4	21	Right-handed alpha
Helix 41	AE5	g	33	45	Right-handed alpha
Helix 42	AE6	g	55	66	Right-handed alpha
Helix 43	AE7	g	88	103	Right-handed alpha
Helix 44	AE8	g	119	127	Right-handed alpha
Helix 45	AE9	h	25	29	Right-handed 310
Helix 46	AF1	h	31	43	Right-handed alpha
Helix 47	AF2	h	75	80	Right-handed alpha
Helix 48	AF3	h	97	110	Right-handed alpha
Helix 49	AF4	h	116	129	Right-handed alpha
Helix 50	AF5	i	27	40	Right-handed alpha
Helix 51	AF6	i	61	65	Right-handed 310
Helix 52	AF7	i	92	98	Right-handed alpha
Helix 53	AF8	i	100	111	Right-handed alpha
Helix 54	AF9	i	115	123	Right-handed alpha
Helix 55	AG1	i	133	139	Right-handed 310
Helix 56	AG2	j	111	117	Right-handed alpha
Helix 57	AG3	k	57	62	Right-handed 310
Helix 58	AG4	k	82	86	Right-handed alpha
Helix 59	AG5	k	94	101	Right-handed alpha
Helix 60	AG6	k	132	142	Right-handed alpha
Helix 61	AG7	l	44	59	Right-handed alpha
Helix 62	AG8	l	110	124	Right-handed alpha
Helix 63	AG9	m	10	29	Right-handed alpha
Helix 64	AH1	m	35	52	Right-handed alpha
Helix 65	AH2	m	56	65	Right-handed alpha
Helix 66	AH3	m	74	86	Right-handed alpha
Helix 67	AH4	n	5	23	Right-handed alpha
Helix 68	AH5	n	57	61	Right-handed alpha
Helix 69	AH6	n	71	84	Right-handed alpha
Helix 70	AH7	n	100	111	Right-handed alpha
Helix 71	AH8	o	8	13	Right-handed alpha
Helix 72	AH9	o	58	61	Right-handed 310
Helix 73	AI1	o	102	106	Right-handed 310
Helix 74	AI2	p	5	20	Right-handed alpha
Helix 75	AI3	p	24	29	Right-handed 310
Helix 76	AI4	p	30	71	Right-handed alpha
Helix 77	AI5	p	74	85	Right-handed alpha
Helix 78	AI6	p	91	101	Right-handed alpha
Helix 79	AI7	p	104	112	Right-handed alpha
Helix 80	AI8	r	13	25	Right-handed alpha
Helix 81	AI9	r	29	38	Right-handed alpha
Helix 82	AJ1	r	41	61	Right-handed alpha
Helix 83	AJ2	r	113	134	Right-handed alpha
Helix 84	AJ3	r	135	138	Right-handed 310
Helix 85	AJ4	s	13	21	Right-handed alpha
Helix 86	AJ5	s	36	49	Right-handed alpha
Helix 87	AJ6	v	52	61	Right-handed alpha
Helix 88	AJ7	w	3	9	Right-handed alpha
Helix 89	AJ8	w	13	35	Right-handed alpha
Helix 90	AJ9	w	42	59	Right-handed alpha
Helix 91	AK1	w	82	109	Right-handed alpha
Helix 92	AK2	y	9	18	Right-handed alpha
Helix 93	AK3	y	19	21	Right-handed 310

There are 50 sheets in PDB entry 7PAU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4, AF5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	1	12	14	first strand
Strand 2	1	17	20	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	15	19	first strand
Strand 2	2	22	26	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	7	43	45	first strand
Strand 2	7	48	50	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	7	56	59	first strand
Strand 2	7	65	70	anti-parallel
Strand 3	7	99	103	anti-parallel
Strand 4	7	94	96	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	3	5	first strand
Strand 2	a	18	20	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	38	40	first strand
Strand 2	a	65	67	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	105	110	first strand
Strand 2	a	96	101	anti-parallel
Strand 3	a	81	87	anti-parallel
Strand 4	a	120	121	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	135	137	first strand
Strand 2	a	197	200	anti-parallel
Strand 3	a	147	148	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	169	173	first strand
Strand 2	a	180	183	anti-parallel
Strand 3	a	188	192	anti-parallel
Strand 4	a	278	281	anti-parallel

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There are 7 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	b	5	18	first strand
Strand 2	b	22	31	anti-parallel
Strand 3	b	190	194	anti-parallel
Strand 4	b	173	185	anti-parallel
Strand 5	b	107	113	anti-parallel
Strand 6	b	204	209	anti-parallel
Strand 7	b	5	18	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	b	35	40	first strand
Strand 2	b	49	56	anti-parallel
Strand 3	b	78	85	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	b	118	119	first strand
Strand 2	b	168	169	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	c	3	7	first strand
Strand 2	c	13	19	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	c	125	127	first strand
Strand 2	c	195	199	parallel
Strand 3	c	156	161	parallel
Strand 4	c	179	182	parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	d	66	67	first strand
Strand 2	d	87	91	anti-parallel
Strand 3	d	31	37	anti-parallel
Strand 4	d	153	155	anti-parallel
Strand 5	d	129	131	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	d	66	67	first strand
Strand 2	d	87	91	anti-parallel
Strand 3	d	31	37	anti-parallel
Strand 4	d	157	158	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	e	17	20	first strand
Strand 2	e	24	28	anti-parallel
Strand 3	e	33	37	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	e	44	49	first strand
Strand 2	e	52	57	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	e	125	130	first strand
Strand 2	e	133	138	anti-parallel
Strand 3	e	86	93	anti-parallel
Strand 4	e	164	166	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	e	98	102	first strand
Strand 2	e	105	109	anti-parallel
Strand 3	e	116	119	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	f	87	88	first strand
Strand 2	f	77	84	anti-parallel
Strand 3	f	137	145	parallel
Strand 4	f	122	127	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	f	92	93	first strand
Strand 2	f	117	118	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	g	50	52	first strand
Strand 2	g	81	84	anti-parallel
Strand 3	g	24	29	anti-parallel
Strand 4	g	106	112	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	h	11	15	first strand
Strand 2	h	50	54	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	i	125	127	first strand
Strand 2	i	57	60	parallel
Strand 3	i	19	22	parallel
Strand 4	i	141	142	parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	i	76	80	first strand
Strand 2	i	87	91	anti-parallel

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There are 6 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	j	7	10	first strand
Strand 2	j	16	24	anti-parallel
Strand 3	j	38	46	anti-parallel
Strand 4	j	57	62	anti-parallel
Strand 5	j	83	87	anti-parallel
Strand 6	j	7	10	parallel

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There are 7 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	j	69	70	first strand
Strand 2	j	76	78	anti-parallel
Strand 3	o	73	80	anti-parallel
Strand 4	o	63	70	anti-parallel
Strand 5	o	43	56	anti-parallel
Strand 6	o	30	38	anti-parallel
Strand 7	o	86	92	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	j	102	103	first strand
Strand 2	j	121	122	parallel

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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	k	78	81	first strand
Strand 2	k	112	115	parallel
Strand 3	k	130	131	parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	k	125	128	first strand
Strand 2	k	145	148	parallel

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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	l	63	66	first strand
Strand 2	l	101	107	anti-parallel
Strand 3	l	32	36	anti-parallel
Strand 4	l	131	133	anti-parallel

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There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	l	40	43	first strand
Strand 2	l	89	97	anti-parallel
Strand 3	l	72	76	anti-parallel

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There are 3 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	m	30	34	first strand
Strand 2	m	112	118	anti-parallel
Strand 3	m	98	105	anti-parallel

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There are 4 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	n	50	56	first strand
Strand 2	n	39	45	anti-parallel
Strand 3	n	28	34	anti-parallel
Strand 4	n	89	92	parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	q	2	7	first strand
Strand 2	q	10	15	anti-parallel

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There are 4 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	q	19	23	first strand
Strand 2	q	88	94	anti-parallel
Strand 3	q	55	64	anti-parallel
Strand 4	q	32	35	anti-parallel

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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	q	68	72	first strand
Strand 2	q	81	85	anti-parallel

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There are 3 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	r	5	6	first strand
Strand 2	r	92	108	anti-parallel
Strand 3	r	70	88	anti-parallel

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There are 4 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	s	7	9	first strand
Strand 2	s	27	31	anti-parallel
Strand 3	s	78	84	anti-parallel
Strand 4	s	54	60	anti-parallel

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There are 2 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	s	64	65	first strand
Strand 2	s	73	74	anti-parallel

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There are 5 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	t	69	70	first strand
Strand 2	t	33	37	anti-parallel
Strand 3	t	20	28	anti-parallel
Strand 4	t	9	12	anti-parallel
Strand 5	t	74	75	anti-parallel

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There are 2 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	t	41	44	first strand
Strand 2	t	63	66	anti-parallel

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There are 4 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	u	36	37	first strand
Strand 2	u	50	53	anti-parallel
Strand 3	u	72	75	anti-parallel
Strand 4	u	65	68	anti-parallel

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There are 3 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	u	60	61	first strand
Strand 2	u	92	98	parallel
Strand 3	u	80	86	anti-parallel

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There are 2 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	v	13	16	first strand
Strand 2	v	26	29	anti-parallel

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There are 2 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	v	33	34	first strand
Strand 2	v	50	51	anti-parallel

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There are 3 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	x	21	24	first strand
Strand 2	x	13	16	anti-parallel
Strand 3	x	34	36	parallel

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There are 3 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	y	42	43	first strand
Strand 2	y	47	48	anti-parallel
Strand 3	y	51	52	anti-parallel

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There are 4 strands in AF5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	z	19	22	first strand
Strand 2	z	6	11	anti-parallel
Strand 3	z	43	50	anti-parallel
Strand 4	z	34	38	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7PAU

Analysis of interatomic Contacts of Structural Units in PDB entry:
7PAU