Analysis of interatomic Contacts of Structural Units in PDB entry:
7PC2

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7PC2 entry

There are 18 chains in PDB entry 7PC2 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
O	GLN 1	VAL 130
P	GLU 1	LYS 108
M	GLN 1	VAL 130
N	GLU 1	LYS 108
Q	GLN 1	VAL 130
R	GLU 1	LYS 108
A	GLU 32	VAL 506
B	GLU 32	VAL 506
C	GLU 32	VAL 506
D	LEU 520	ASP 664
E	LEU 520	ASP 664
F	LEU 520	ASP 664
K	GLN 1	VAL 111
G	GLN 1	VAL 111
I	GLN 1	VAL 111
L	ASP 1	LEU 106
H	ASP 1	LEU 106
J	ASP 1	LEU 106

There are 52 helices in PDB entry 7PC2. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	O	111	116	Right-handed alpha
Helix 2	AA2	P	79	83	Right-handed 310
Helix 3	AA3	M	111	116	Right-handed alpha
Helix 4	AA4	N	79	83	Right-handed 310
Helix 5	AA5	Q	111	116	Right-handed alpha
Helix 6	AA6	R	79	83	Right-handed 310
Helix 7	AA7	A	98	115	Right-handed alpha
Helix 8	AA8	A	122	126	Right-handed 310
Helix 9	AA9	A	335	352	Right-handed alpha
Helix 10	AB1	A	368	373	Right-handed alpha
Helix 11	AB2	A	475	481	Right-handed alpha
Helix 12	AB3	B	98	115	Right-handed alpha
Helix 13	AB4	B	122	126	Right-handed 310
Helix 14	AB5	B	335	352	Right-handed alpha
Helix 15	AB6	B	368	373	Right-handed alpha
Helix 16	AB7	B	475	481	Right-handed alpha
Helix 17	AB8	C	98	115	Right-handed alpha
Helix 18	AB9	C	122	126	Right-handed 310
Helix 19	AC1	C	335	351	Right-handed alpha
Helix 20	AC2	C	475	481	Right-handed alpha
Helix 21	AC3	D	523	528	Right-handed 310
Helix 22	AC4	D	529	534	Right-handed alpha
Helix 23	AC5	D	536	543	Right-handed alpha
Helix 24	AC6	D	573	596	Right-handed alpha
Helix 25	AC7	D	619	624	Right-handed alpha
Helix 26	AC8	D	627	634	Right-handed alpha
Helix 27	AC9	D	638	648	Right-handed alpha
Helix 28	AD1	D	650	662	Right-handed alpha
Helix 29	AD2	E	523	527	Right-handed 310
Helix 30	AD3	E	529	534	Right-handed alpha
Helix 31	AD4	E	536	543	Right-handed alpha
Helix 32	AD5	E	572	596	Right-handed alpha
Helix 33	AD6	E	619	624	Right-handed alpha
Helix 34	AD7	E	627	634	Right-handed alpha
Helix 35	AD8	E	638	649	Right-handed alpha
Helix 36	AD9	E	650	662	Right-handed alpha
Helix 37	AE1	F	523	527	Right-handed 310
Helix 38	AE2	F	529	534	Right-handed alpha
Helix 39	AE3	F	536	543	Right-handed alpha
Helix 40	AE4	F	572	596	Right-handed alpha
Helix 41	AE5	F	619	624	Right-handed alpha
Helix 42	AE6	F	627	634	Right-handed alpha
Helix 43	AE7	F	638	648	Right-handed alpha
Helix 44	AE8	F	650	663	Right-handed alpha
Helix 45	AE9	K	28	32	Right-handed 310
Helix 46	AF1	K	60	64	Right-handed 310
Helix 47	AF2	K	83	87	Right-handed 310
Helix 48	AF3	G	28	32	Right-handed 310
Helix 49	AF4	G	60	64	Right-handed 310
Helix 50	AF5	G	83	87	Right-handed 310
Helix 51	AF6	I	28	32	Right-handed 310
Helix 52	AF7	I	83	87	Right-handed 310

There are 57 sheets in PDB entry 7PC2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4, AF5, AF6, AF7, AF8, AF9, AG1, AG2, AG3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	4	7	first strand
Strand 2	O	17	24	anti-parallel
Strand 3	O	78	84	anti-parallel
Strand 4	O	68	73	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	58	60	first strand
Strand 2	O	45	51	anti-parallel
Strand 3	O	34	39	anti-parallel
Strand 4	O	92	98	anti-parallel
Strand 5	O	126	128	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	4	7	first strand
Strand 2	P	19	25	anti-parallel
Strand 3	P	70	75	anti-parallel
Strand 4	P	62	67	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	45	48	first strand
Strand 2	P	33	38	anti-parallel
Strand 3	P	85	90	anti-parallel
Strand 4	P	103	104	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	4	7	first strand
Strand 2	M	17	24	anti-parallel
Strand 3	M	78	84	anti-parallel
Strand 4	M	68	73	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	58	60	first strand
Strand 2	M	45	51	anti-parallel
Strand 3	M	34	39	anti-parallel
Strand 4	M	92	98	anti-parallel
Strand 5	M	126	128	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	4	7	first strand
Strand 2	N	19	25	anti-parallel
Strand 3	N	70	75	anti-parallel
Strand 4	N	62	67	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	45	48	first strand
Strand 2	N	33	38	anti-parallel
Strand 3	N	85	93	anti-parallel
Strand 4	N	96	98	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	45	48	first strand
Strand 2	N	33	38	anti-parallel
Strand 3	N	85	93	anti-parallel
Strand 4	N	103	104	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	4	7	first strand
Strand 2	Q	17	24	anti-parallel
Strand 3	Q	78	84	anti-parallel
Strand 4	Q	68	73	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	58	60	first strand
Strand 2	Q	45	51	anti-parallel
Strand 3	Q	34	39	anti-parallel
Strand 4	Q	92	98	anti-parallel
Strand 5	Q	126	128	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	4	7	first strand
Strand 2	R	19	25	anti-parallel
Strand 3	R	70	75	anti-parallel
Strand 4	R	62	67	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	10	12	first strand
Strand 2	R	103	106	parallel
Strand 3	R	85	90	anti-parallel
Strand 4	R	33	38	anti-parallel
Strand 5	R	45	48	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	494	499	first strand
Strand 2	A	35	40	anti-parallel
Strand 3	D	603	609	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	45	47	first strand
Strand 2	A	486	491	anti-parallel
Strand 3	A	223	228	anti-parallel
Strand 4	A	242	245	anti-parallel
Strand 5	A	83	85	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	75	76	first strand
Strand 2	A	53	56	parallel
Strand 3	A	216	218	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	91	93	first strand
Strand 2	A	237	239	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	130	133	first strand
Strand 2	A	154	162	anti-parallel
Strand 3	A	169	177	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	181	183	first strand
Strand 2	A	191	193	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	200	202	first strand
Strand 2	A	432	435	parallel
Strand 3	A	423	424	anti-parallel

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There are 7 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	259	261	first strand
Strand 2	A	441	456	anti-parallel
Strand 3	A	292	302	anti-parallel
Strand 4	A	329	334	anti-parallel
Strand 5	A	413	421	anti-parallel
Strand 6	A	381	385	anti-parallel
Strand 7	A	374	378	anti-parallel

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There are 6 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	271	273	first strand
Strand 2	A	284	287	anti-parallel
Strand 3	A	441	456	anti-parallel
Strand 4	A	466	470	anti-parallel
Strand 5	A	359	361	parallel
Strand 6	A	393	395	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	307	308	first strand
Strand 2	A	316	317	anti-parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	494	499	first strand
Strand 2	B	35	40	anti-parallel
Strand 3	F	603	609	anti-parallel

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There are 5 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	45	47	first strand
Strand 2	B	486	491	anti-parallel
Strand 3	B	223	228	anti-parallel
Strand 4	B	242	245	anti-parallel
Strand 5	B	83	85	anti-parallel

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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	75	76	first strand
Strand 2	B	53	56	parallel
Strand 3	B	216	218	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	91	93	first strand
Strand 2	B	237	239	anti-parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	130	133	first strand
Strand 2	B	154	162	anti-parallel
Strand 3	B	169	177	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	181	183	first strand
Strand 2	B	191	193	anti-parallel

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There are 7 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	259	261	first strand
Strand 2	B	441	456	anti-parallel
Strand 3	B	292	302	anti-parallel
Strand 4	B	329	334	anti-parallel
Strand 5	B	413	421	anti-parallel
Strand 6	B	381	385	anti-parallel
Strand 7	B	374	378	anti-parallel

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There are 6 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	271	273	first strand
Strand 2	B	284	287	anti-parallel
Strand 3	B	441	456	anti-parallel
Strand 4	B	466	470	anti-parallel
Strand 5	B	359	361	parallel
Strand 6	B	393	395	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	307	308	first strand
Strand 2	B	316	317	anti-parallel

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There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	494	499	first strand
Strand 2	C	35	40	anti-parallel
Strand 3	E	603	609	anti-parallel

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There are 5 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	45	47	first strand
Strand 2	C	486	491	anti-parallel
Strand 3	C	223	228	anti-parallel
Strand 4	C	242	245	anti-parallel
Strand 5	C	83	85	anti-parallel

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There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	75	76	first strand
Strand 2	C	53	56	parallel
Strand 3	C	216	218	anti-parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	91	93	first strand
Strand 2	C	237	239	anti-parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	154	162	first strand
Strand 2	C	169	177	anti-parallel

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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	181	183	first strand
Strand 2	C	191	193	anti-parallel

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There are 7 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	259	261	first strand
Strand 2	C	441	456	anti-parallel
Strand 3	C	292	302	anti-parallel
Strand 4	C	330	334	anti-parallel
Strand 5	C	413	421	anti-parallel
Strand 6	C	381	385	anti-parallel
Strand 7	C	374	378	anti-parallel

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There are 6 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	271	273	first strand
Strand 2	C	284	287	anti-parallel
Strand 3	C	441	456	anti-parallel
Strand 4	C	466	470	anti-parallel
Strand 5	C	359	361	parallel
Strand 6	C	393	395	anti-parallel

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There are 2 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	307	308	first strand
Strand 2	C	316	317	anti-parallel

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There are 4 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	4	6	first strand
Strand 2	K	18	24	anti-parallel
Strand 3	K	76	82	anti-parallel
Strand 4	K	67	71	anti-parallel

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There are 6 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	10	11	first strand
Strand 2	K	107	110	parallel
Strand 3	K	88	95	anti-parallel
Strand 4	K	34	39	anti-parallel
Strand 5	K	45	52	anti-parallel
Strand 6	K	56	58	anti-parallel

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There are 4 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	10	11	first strand
Strand 2	K	107	110	parallel
Strand 3	K	88	95	anti-parallel
Strand 4	K	100	103	anti-parallel

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There are 6 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	10	11	first strand
Strand 2	G	107	110	parallel
Strand 3	G	88	94	anti-parallel
Strand 4	G	34	39	anti-parallel
Strand 5	G	45	52	anti-parallel
Strand 6	G	56	58	anti-parallel

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There are 4 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	10	11	first strand
Strand 2	G	107	110	parallel
Strand 3	G	88	94	anti-parallel
Strand 4	G	102	103	anti-parallel

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There are 3 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	18	24	first strand
Strand 2	G	76	82	anti-parallel
Strand 3	G	67	71	anti-parallel

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There are 4 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	4	6	first strand
Strand 2	I	18	24	anti-parallel
Strand 3	I	76	82	anti-parallel
Strand 4	I	67	71	anti-parallel

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There are 6 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	10	11	first strand
Strand 2	I	107	110	parallel
Strand 3	I	88	95	anti-parallel
Strand 4	I	34	39	anti-parallel
Strand 5	I	45	52	anti-parallel
Strand 6	I	56	58	anti-parallel

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There are 4 strands in AF5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	10	11	first strand
Strand 2	I	107	110	parallel
Strand 3	I	88	95	anti-parallel
Strand 4	I	100	103	anti-parallel

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There are 4 strands in AF6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	5	6	first strand
Strand 2	L	19	24	anti-parallel
Strand 3	L	70	75	anti-parallel
Strand 4	L	62	67	anti-parallel

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There are 3 strands in AF7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	45	48	first strand
Strand 2	L	34	38	anti-parallel
Strand 3	L	85	89	anti-parallel

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There are 4 strands in AF8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	4	6	first strand
Strand 2	H	19	25	anti-parallel
Strand 3	H	70	75	anti-parallel
Strand 4	H	62	67	anti-parallel

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There are 4 strands in AF9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	45	48	first strand
Strand 2	H	34	38	anti-parallel
Strand 3	H	85	89	anti-parallel
Strand 4	H	102	103	anti-parallel

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There are 4 strands in AG1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	4	6	first strand
Strand 2	J	19	25	anti-parallel
Strand 3	J	70	75	anti-parallel
Strand 4	J	62	67	anti-parallel

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There are 5 strands in AG2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	10	11	first strand
Strand 2	J	102	104	parallel
Strand 3	J	85	90	anti-parallel
Strand 4	J	34	38	anti-parallel
Strand 5	J	45	49	anti-parallel

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There are 4 strands in AG3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	10	11	first strand
Strand 2	J	102	104	parallel
Strand 3	J	85	90	anti-parallel
Strand 4	J	97	98	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7PC2

Analysis of interatomic Contacts of Structural Units in PDB entry:
7PC2