Analysis of interatomic Contacts of Structural Units in PDB entry:
7PC3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7PC3 entry

There are 2 chains in PDB entry 7PC3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 314ASP 725
C
 HIS 200VAL 206
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 22 helices in PDB entry 7PC3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
357 363Right-handed alpha
Helix 2
AA2
A
383 393Right-handed alpha
Helix 3
AA3
A
417 434Right-handed alpha
Helix 4
AA4
A
438 447Right-handed alpha
Helix 5
AA5
A
450 466Right-handed alpha
Helix 6
AA6
A
468 477Right-handed alpha
Helix 7
AA7
A
478 489Right-handed alpha
Helix 8
AA8
A
491 504Right-handed alpha
Helix 9
AA9
A
510 521Right-handed alpha
Helix 10
AB1
A
522 538Right-handed alpha
Helix 11
AB2
A
540 549Right-handed alpha
Helix 12
AB3
A
550 562Right-handed alpha
Helix 13
AB4
A
573 588Right-handed alpha
Helix 14
AB5
A
595 606Right-handed alpha
Helix 15
AB6
A
607 622Right-handed alpha
Helix 16
AB7
A
625 634Right-handed alpha
Helix 17
AB8
A
635 651Right-handed alpha
Helix 18
AB9
A
651 665Right-handed alpha
Helix 19
AC1
A
670 682Right-handed alpha
Helix 20
AC2
A
685 698Right-handed alpha
Helix 21
AC3
A
700 709Right-handed alpha
Helix 22
AC4
A
710 722Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 7PC3. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
317 323first strand
Strand 2
A
397 403anti-parallel
Strand 3
A
370 374anti-parallel
Strand 4
A
377 378anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
317 323first strand
Strand 2
A
397 403anti-parallel
Strand 3
A
370 374anti-parallel
Strand 4
A
348 353anti-parallel
Strand 5
A
331 335anti-parallel
Strand 6
C
204 206anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il