Analysis of interatomic Contacts of Structural Units in PDB entry:
7PC5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7PC5 entry

There are 2 chains in PDB entry 7PC5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 859ASP 1272
B
 LYS 31VAL 36
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 7PC5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
897 903Right-handed alpha
Helix 2
AA2
A
923 937Right-handed alpha
Helix 3
AA3
A
964 981Right-handed alpha
Helix 4
AA4
A
985 994Right-handed alpha
Helix 5
AA5
A
997 1013Right-handed alpha
Helix 6
AA6
A
1015 1024Right-handed alpha
Helix 7
AA7
A
1025 1037Right-handed alpha
Helix 8
AA8
A
1038 1051Right-handed alpha
Helix 9
AA9
A
1057 1068Right-handed alpha
Helix 10
AB1
A
1069 1085Right-handed alpha
Helix 11
AB2
A
1087 1096Right-handed alpha
Helix 12
AB3
A
1097 1109Right-handed alpha
Helix 13
AB4
A
1120 1135Right-handed alpha
Helix 14
AB5
A
1142 1153Right-handed alpha
Helix 15
AB6
A
1154 1169Right-handed alpha
Helix 16
AB7
A
1172 1181Right-handed alpha
Helix 17
AB8
A
1182 1198Right-handed alpha
Helix 18
AB9
A
1198 1212Right-handed alpha
Helix 19
AC1
A
1217 1229Right-handed alpha
Helix 20
AC2
A
1232 1245Right-handed alpha
Helix 21
AC3
A
1247 1256Right-handed alpha
Helix 22
AC4
A
1257 1269Right-handed alpha
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There are 2 sheets in PDB entry 7PC5. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
860 865first strand
Strand 2
A
943 948anti-parallel
Strand 3
A
910 914anti-parallel
Strand 4
A
917 918anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
889 893first strand
Strand 2
A
874 877anti-parallel
Strand 3
B
33 35anti-parallel
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