Analysis of interatomic Contacts of Structural Units in PDB entry:
7PCB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7PCB entry

There is 1 chain in PDB entry 7PCB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 40ASP 454
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 7PCB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
88 94Right-handed alpha
Helix 2
AA2
A
113 123Right-handed alpha
Helix 3
AA3
A
136 140Right-handed 310
Helix 4
AA4
A
146 163Right-handed alpha
Helix 5
AA5
A
167 176Right-handed alpha
Helix 6
AA6
A
179 195Right-handed alpha
Helix 7
AA7
A
197 206Right-handed alpha
Helix 8
AA8
A
207 219Right-handed alpha
Helix 9
AA9
A
220 233Right-handed alpha
Helix 10
AB1
A
239 250Right-handed alpha
Helix 11
AB2
A
251 267Right-handed alpha
Helix 12
AB3
A
269 278Right-handed alpha
Helix 13
AB4
A
279 291Right-handed alpha
Helix 14
AB5
A
302 316Right-handed alpha
Helix 15
AB6
A
324 335Right-handed alpha
Helix 16
AB7
A
336 351Right-handed alpha
Helix 17
AB8
A
354 363Right-handed alpha
Helix 18
AB9
A
364 380Right-handed alpha
Helix 19
AC1
A
380 394Right-handed alpha
Helix 20
AC2
A
399 410Right-handed alpha
Helix 21
AC3
A
411 427Right-handed alpha
Helix 22
AC4
A
429 438Right-handed alpha
Helix 23
AC5
A
439 451Right-handed alpha
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There are 2 sheets in PDB entry 7PCB. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
42 47first strand
Strand 2
A
127 133anti-parallel
Strand 3
A
100 104anti-parallel
Strand 4
A
107 108anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
55 58first strand
Strand 2
A
80 84anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il