Analysis of interatomic Contacts of Structural Units in PDB entry:
7PGJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7PGJ entry

There is 1 chain in PDB entry 7PGJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 15ALA 357
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 7PGJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 24Right-handed alpha
Helix 2
AA2
A
26 38Right-handed alpha
Helix 3
AA3
A
39 46Right-handed alpha
Helix 4
AA4
A
50 59Right-handed alpha
Helix 5
AA5
A
61 75Right-handed alpha
Helix 6
AA6
A
91 96Right-handed 310
Helix 7
AA7
A
102 107Right-handed alpha
Helix 8
AA8
A
111 117Right-handed alpha
Helix 9
AA9
A
118 121Right-handed 310
Helix 10
AB1
A
122 130Right-handed alpha
Helix 11
AB2
A
133 139Right-handed alpha
Helix 12
AB3
A
141 148Right-handed alpha
Helix 13
AB4
A
149 161Right-handed alpha
Helix 14
AB5
A
168 174Right-handed alpha
Helix 15
AB6
A
191 201Right-handed alpha
Helix 16
AB7
A
213 225Right-handed alpha
Helix 17
AB8
A
254 258Right-handed 310
Helix 18
AB9
A
259 273Right-handed alpha
Helix 19
AC1
A
299 312Right-handed alpha
Helix 20
AC2
A
317 328Right-handed alpha
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There are 2 sheets in PDB entry 7PGJ. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
78 80first strand
Strand 2
A
86 88anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
231 235first strand
Strand 2
A
205 210parallel
Strand 3
A
182 186parallel
Strand 4
A
246 252parallel
Strand 5
A
274 284parallel
Strand 6
A
349 355anti-parallel
Strand 7
A
330 336anti-parallel
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