Analysis of interatomic Contacts of Structural Units in PDB entry:
7PGU

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7PGU entry

There are 2 chains in PDB entry 7PGU (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
F	HIS 4	GLY 2745
N	HIS 4	GLY 2745

There are274 helices in PDB entry 7PGU. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	F	4	19	Right-handed alpha
Helix 2	AA2	F	33	48	Right-handed alpha
Helix 3	AA3	F	50	67	Right-handed alpha
Helix 4	AA4	F	72	96	Right-handed alpha
Helix 5	AA5	F	105	112	Right-handed alpha
Helix 6	AA6	F	113	122	Right-handed alpha
Helix 7	AA7	F	129	145	Right-handed alpha
Helix 8	AA8	F	149	167	Right-handed alpha
Helix 9	AA9	F	176	182	Right-handed 310
Helix 10	AB1	F	186	201	Right-handed alpha
Helix 11	AB2	F	205	227	Right-handed alpha
Helix 12	AB3	F	227	237	Right-handed alpha
Helix 13	AB4	F	239	257	Right-handed alpha
Helix 14	AB5	F	259	275	Right-handed alpha
Helix 15	AB6	F	277	286	Right-handed alpha
Helix 16	AB7	F	293	309	Right-handed alpha
Helix 17	AB8	F	313	332	Right-handed alpha
Helix 18	AB9	F	340	358	Right-handed alpha
Helix 19	AC1	F	372	387	Right-handed alpha
Helix 20	AC2	F	393	399	Right-handed alpha
Helix 21	AC3	F	403	420	Right-handed alpha
Helix 22	AC4	F	428	434	Right-handed 310
Helix 23	AC5	F	435	455	Right-handed alpha
Helix 24	AC6	F	483	503	Right-handed alpha
Helix 25	AC7	F	504	507	Right-handed 310
Helix 26	AC8	F	520	531	Right-handed alpha
Helix 27	AC9	F	538	552	Right-handed alpha
Helix 28	AD1	F	565	586	Right-handed alpha
Helix 29	AD2	F	592	618	Right-handed alpha
Helix 30	AD3	F	677	687	Right-handed alpha
Helix 31	AD4	F	687	693	Right-handed alpha
Helix 32	AD5	F	699	721	Right-handed alpha
Helix 33	AD6	F	727	732	Right-handed alpha
Helix 34	AD7	F	734	746	Right-handed alpha
Helix 35	AD8	F	751	764	Right-handed alpha
Helix 36	AD9	F	770	793	Right-handed alpha
Helix 37	AE1	F	832	847	Right-handed alpha
Helix 38	AE2	F	889	902	Right-handed alpha
Helix 39	AE3	F	909	924	Right-handed alpha
Helix 40	AE4	F	926	928	Right-handed 310
Helix 41	AE5	F	929	942	Right-handed alpha
Helix 42	AE6	F	956	973	Right-handed alpha
Helix 43	AE7	F	979	984	Right-handed alpha
Helix 44	AE8	F	988	1000	Right-handed alpha
Helix 45	AE9	F	1007	1025	Right-handed alpha
Helix 46	AF1	F	1033	1046	Right-handed alpha
Helix 47	AF2	F	1052	1058	Right-handed alpha
Helix 48	AF3	F	1060	1062	Right-handed 310
Helix 49	AF4	F	1063	1080	Right-handed alpha
Helix 50	AF5	F	1094	1116	Right-handed alpha
Helix 51	AF6	F	1136	1155	Right-handed alpha
Helix 52	AF7	F	1156	1161	Right-handed alpha
Helix 53	AF8	F	1164	1170	Right-handed 310
Helix 54	AF9	F	1172	1189	Right-handed alpha
Helix 55	AG1	F	1196	1201	Right-handed alpha
Helix 56	AG2	F	1205	1213	Right-handed alpha
Helix 57	AG3	F	1221	1231	Right-handed alpha
Helix 58	AG4	F	1232	1234	Right-handed 310
Helix 59	AG5	F	1235	1250	Right-handed alpha
Helix 60	AG6	F	1252	1268	Right-handed alpha
Helix 61	AG7	F	1270	1277	Right-handed 310
Helix 62	AG8	F	1279	1293	Right-handed alpha
Helix 63	AG9	F	1293	1311	Right-handed alpha
Helix 64	AH1	F	1312	1315	Right-handed 310
Helix 65	AH2	F	1331	1353	Right-handed alpha
Helix 66	AH3	F	1358	1379	Right-handed alpha
Helix 67	AH4	F	1400	1413	Right-handed alpha
Helix 68	AH5	F	1414	1420	Right-handed alpha
Helix 69	AH6	F	1432	1452	Right-handed alpha
Helix 70	AH7	F	1461	1463	Right-handed 310
Helix 71	AH8	F	1464	1471	Right-handed alpha
Helix 72	AH9	F	1471	1484	Right-handed alpha
Helix 73	AI1	F	1500	1514	Right-handed alpha
Helix 74	AI2	F	1514	1525	Right-handed alpha
Helix 75	AI3	F	1534	1547	Right-handed alpha
Helix 76	AI4	F	1565	1576	Right-handed alpha
Helix 77	AI5	F	1585	1591	Right-handed alpha
Helix 78	AI6	F	1611	1613	Right-handed 310
Helix 79	AI7	F	1619	1630	Right-handed alpha
Helix 80	AI8	F	1649	1653	Right-handed 310
Helix 81	AI9	F	1655	1660	Right-handed alpha
Helix 82	AJ1	F	1661	1664	Right-handed 310
Helix 83	AJ2	F	1667	1673	Right-handed alpha
Helix 84	AJ3	F	1683	1693	Right-handed alpha
Helix 85	AJ4	F	1695	1700	Right-handed 310
Helix 86	AJ5	F	1711	1719	Right-handed alpha
Helix 87	AJ6	F	1727	1733	Right-handed alpha
Helix 88	AJ7	F	1816	1835	Right-handed alpha
Helix 89	AJ8	F	1846	1849	Right-handed 310
Helix 90	AJ9	F	1850	1862	Right-handed alpha
Helix 91	AK1	F	1866	1884	Right-handed alpha
Helix 92	AK2	F	1904	1918	Right-handed alpha
Helix 93	AK3	F	1919	1921	Right-handed 310
Helix 94	AK4	F	1922	1935	Right-handed alpha
Helix 95	AK5	F	1938	1950	Right-handed alpha
Helix 96	AK6	F	1951	1955	Right-handed 310
Helix 97	AK7	F	1956	1961	Right-handed alpha
Helix 98	AK8	F	1967	1985	Right-handed alpha
Helix 99	AK9	F	1988	2001	Right-handed alpha
Helix 100	AL1	F	2002	2005	Right-handed 310
Helix 101	AL2	F	2006	2022	Right-handed alpha
Helix 102	AL3	F	2025	2042	Right-handed alpha
Helix 103	AL4	F	2042	2060	Right-handed alpha
Helix 104	AL5	F	2061	2063	Right-handed 310
Helix 105	AL6	F	2074	2090	Right-handed alpha
Helix 106	AL7	F	2091	2093	Right-handed 310
Helix 107	AL8	F	2095	2111	Right-handed alpha
Helix 108	AL9	F	2115	2135	Right-handed alpha
Helix 109	AM1	F	2142	2156	Right-handed alpha
Helix 110	AM2	F	2158	2165	Right-handed alpha
Helix 111	AM3	F	2172	2178	Right-handed alpha
Helix 112	AM4	F	2198	2219	Right-handed alpha
Helix 113	AM5	F	2224	2238	Right-handed alpha
Helix 114	AM6	F	2244	2256	Right-handed alpha
Helix 115	AM7	F	2260	2281	Right-handed alpha
Helix 116	AM8	F	2283	2302	Right-handed alpha
Helix 117	AM9	F	2303	2305	Right-handed 310
Helix 118	AN1	F	2310	2324	Right-handed alpha
Helix 119	AN2	F	2327	2348	Right-handed alpha
Helix 120	AN3	F	2355	2364	Right-handed alpha
Helix 121	AN4	F	2367	2379	Right-handed alpha
Helix 122	AN5	F	2385	2395	Right-handed alpha
Helix 123	AN6	F	2396	2400	Right-handed 310
Helix 124	AN7	F	2402	2425	Right-handed alpha
Helix 125	AN8	F	2435	2443	Right-handed alpha
Helix 126	AN9	F	2446	2453	Right-handed alpha
Helix 127	AO1	F	2612	2630	Right-handed alpha
Helix 128	AO2	F	2632	2650	Right-handed alpha
Helix 129	AO3	F	2653	2656	Right-handed 310
Helix 130	AO4	F	2657	2672	Right-handed alpha
Helix 131	AO5	F	2674	2692	Right-handed alpha
Helix 132	AO6	F	2701	2706	Right-handed alpha
Helix 133	AO7	F	2710	2715	Right-handed alpha
Helix 134	AO8	F	2727	2743	Right-handed alpha
Helix 135	AO9	N	5	19	Right-handed alpha
Helix 136	AP1	N	33	48	Right-handed alpha
Helix 137	AP2	N	50	67	Right-handed alpha
Helix 138	AP3	N	72	96	Right-handed alpha
Helix 139	AP4	N	105	112	Right-handed alpha
Helix 140	AP5	N	113	122	Right-handed alpha
Helix 141	AP6	N	129	145	Right-handed alpha
Helix 142	AP7	N	149	167	Right-handed alpha
Helix 143	AP8	N	176	182	Right-handed 310
Helix 144	AP9	N	186	202	Right-handed alpha
Helix 145	AQ1	N	205	227	Right-handed alpha
Helix 146	AQ2	N	227	237	Right-handed alpha
Helix 147	AQ3	N	239	257	Right-handed alpha
Helix 148	AQ4	N	259	277	Right-handed alpha
Helix 149	AQ5	N	277	286	Right-handed alpha
Helix 150	AQ6	N	293	309	Right-handed alpha
Helix 151	AQ7	N	313	332	Right-handed alpha
Helix 152	AQ8	N	340	358	Right-handed alpha
Helix 153	AQ9	N	372	387	Right-handed alpha
Helix 154	AR1	N	393	399	Right-handed alpha
Helix 155	AR2	N	403	418	Right-handed alpha
Helix 156	AR3	N	428	434	Right-handed 310
Helix 157	AR4	N	435	455	Right-handed alpha
Helix 158	AR5	N	483	503	Right-handed alpha
Helix 159	AR6	N	504	507	Right-handed 310
Helix 160	AR7	N	520	531	Right-handed alpha
Helix 161	AR8	N	538	552	Right-handed alpha
Helix 162	AR9	N	554	559	Right-handed alpha
Helix 163	AS1	N	565	586	Right-handed alpha
Helix 164	AS2	N	592	618	Right-handed alpha
Helix 165	AS3	N	677	694	Right-handed alpha
Helix 166	AS4	N	699	721	Right-handed alpha
Helix 167	AS5	N	727	732	Right-handed alpha
Helix 168	AS6	N	734	746	Right-handed alpha
Helix 169	AS7	N	751	764	Right-handed alpha
Helix 170	AS8	N	770	793	Right-handed alpha
Helix 171	AS9	N	832	847	Right-handed alpha
Helix 172	AT1	N	889	899	Right-handed alpha
Helix 173	AT2	N	900	904	Right-handed 310
Helix 174	AT3	N	909	924	Right-handed alpha
Helix 175	AT4	N	926	928	Right-handed 310
Helix 176	AT5	N	929	942	Right-handed alpha
Helix 177	AT6	N	943	945	Right-handed 310
Helix 178	AT7	N	956	974	Right-handed alpha
Helix 179	AT8	N	979	984	Right-handed alpha
Helix 180	AT9	N	988	1000	Right-handed alpha
Helix 181	AU1	N	1005	1023	Right-handed alpha
Helix 182	AU2	N	1033	1046	Right-handed alpha
Helix 183	AU3	N	1052	1058	Right-handed alpha
Helix 184	AU4	N	1060	1062	Right-handed 310
Helix 185	AU5	N	1063	1080	Right-handed alpha
Helix 186	AU6	N	1094	1116	Right-handed alpha
Helix 187	AU7	N	1135	1155	Right-handed alpha
Helix 188	AU8	N	1156	1165	Right-handed alpha
Helix 189	AU9	N	1166	1170	Right-handed 310
Helix 190	AV1	N	1172	1189	Right-handed alpha
Helix 191	AV2	N	1205	1213	Right-handed alpha
Helix 192	AV3	N	1221	1231	Right-handed alpha
Helix 193	AV4	N	1232	1234	Right-handed 310
Helix 194	AV5	N	1235	1250	Right-handed alpha
Helix 195	AV6	N	1252	1268	Right-handed alpha
Helix 196	AV7	N	1270	1277	Right-handed 310
Helix 197	AV8	N	1279	1293	Right-handed alpha
Helix 198	AV9	N	1293	1311	Right-handed alpha
Helix 199	AW1	N	1312	1315	Right-handed 310
Helix 200	AW2	N	1331	1353	Right-handed alpha
Helix 201	AW3	N	1358	1379	Right-handed alpha
Helix 202	AW4	N	1400	1413	Right-handed alpha
Helix 203	AW5	N	1414	1420	Right-handed alpha
Helix 204	AW6	N	1421	1425	Right-handed 310
Helix 205	AW7	N	1432	1452	Right-handed alpha
Helix 206	AW8	N	1461	1463	Right-handed 310
Helix 207	AW9	N	1464	1471	Right-handed alpha
Helix 208	AX1	N	1471	1484	Right-handed alpha
Helix 209	AX2	N	1500	1514	Right-handed alpha
Helix 210	AX3	N	1514	1525	Right-handed alpha
Helix 211	AX4	N	1534	1547	Right-handed alpha
Helix 212	AX5	N	1565	1576	Right-handed alpha
Helix 213	AX6	N	1583	1591	Right-handed alpha
Helix 214	AX7	N	1611	1613	Right-handed 310
Helix 215	AX8	N	1619	1630	Right-handed alpha
Helix 216	AX9	N	1649	1653	Right-handed 310
Helix 217	AY1	N	1655	1660	Right-handed alpha
Helix 218	AY2	N	1661	1664	Right-handed 310
Helix 219	AY3	N	1667	1673	Right-handed alpha
Helix 220	AY4	N	1683	1693	Right-handed alpha
Helix 221	AY5	N	1695	1701	Right-handed 310
Helix 222	AY6	N	1711	1719	Right-handed alpha
Helix 223	AY7	N	1727	1733	Right-handed alpha
Helix 224	AY8	N	1816	1835	Right-handed alpha
Helix 225	AY9	N	1846	1849	Right-handed 310
Helix 226	AZ1	N	1850	1863	Right-handed alpha
Helix 227	AZ2	N	1866	1884	Right-handed alpha
Helix 228	AZ3	N	1904	1918	Right-handed alpha
Helix 229	AZ4	N	1919	1921	Right-handed 310
Helix 230	AZ5	N	1922	1936	Right-handed alpha
Helix 231	AZ6	N	1938	1954	Right-handed alpha
Helix 232	AZ7	N	1956	1961	Right-handed alpha
Helix 233	AZ8	N	1967	1985	Right-handed alpha
Helix 234	AZ9	N	1988	1996	Right-handed alpha
Helix 235	BA1	N	1996	2002	Right-handed alpha
Helix 236	BA2	N	2003	2005	Right-handed 310
Helix 237	BA3	N	2006	2022	Right-handed alpha
Helix 238	BA4	N	2025	2034	Right-handed alpha
Helix 239	BA5	N	2034	2042	Right-handed alpha
Helix 240	BA6	N	2042	2060	Right-handed alpha
Helix 241	BA7	N	2061	2063	Right-handed 310
Helix 242	BA8	N	2074	2090	Right-handed alpha
Helix 243	BA9	N	2091	2093	Right-handed 310
Helix 244	BB1	N	2095	2098	Right-handed 310
Helix 245	BB2	N	2099	2111	Right-handed alpha
Helix 246	BB3	N	2115	2135	Right-handed alpha
Helix 247	BB4	N	2142	2156	Right-handed alpha
Helix 248	BB5	N	2158	2165	Right-handed alpha
Helix 249	BB6	N	2172	2178	Right-handed alpha
Helix 250	BB7	N	2198	2219	Right-handed alpha
Helix 251	BB8	N	2224	2238	Right-handed alpha
Helix 252	BB9	N	2244	2256	Right-handed alpha
Helix 253	BC1	N	2260	2281	Right-handed alpha
Helix 254	BC2	N	2283	2302	Right-handed alpha
Helix 255	BC3	N	2303	2305	Right-handed 310
Helix 256	BC4	N	2310	2315	Right-handed alpha
Helix 257	BC5	N	2315	2324	Right-handed alpha
Helix 258	BC6	N	2327	2348	Right-handed alpha
Helix 259	BC7	N	2355	2364	Right-handed alpha
Helix 260	BC8	N	2367	2379	Right-handed alpha
Helix 261	BC9	N	2385	2395	Right-handed alpha
Helix 262	BD1	N	2396	2400	Right-handed 310
Helix 263	BD2	N	2402	2423	Right-handed alpha
Helix 264	BD3	N	2435	2442	Right-handed alpha
Helix 265	BD4	N	2443	2445	Right-handed 310
Helix 266	BD5	N	2446	2453	Right-handed alpha
Helix 267	BD6	N	2617	2630	Right-handed alpha
Helix 268	BD7	N	2632	2650	Right-handed alpha
Helix 269	BD8	N	2653	2656	Right-handed 310
Helix 270	BD9	N	2657	2672	Right-handed alpha
Helix 271	BE1	N	2674	2692	Right-handed alpha
Helix 272	BE2	N	2702	2707	Right-handed 310
Helix 273	BE3	N	2710	2715	Right-handed alpha
Helix 274	BE4	N	2727	2743	Right-handed alpha

There are 9 sheets in PDB entry 7PGU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	945	946	first strand
Strand 2	F	950	951	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	1593	1598	first strand
Strand 2	F	1604	1609	anti-parallel
Strand 3	F	1639	1644	parallel
Strand 4	F	1674	1680	parallel
Strand 5	F	1706	1708	parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	1739	1740	first strand
Strand 2	F	1751	1757	anti-parallel
Strand 3	F	1761	1766	anti-parallel
Strand 4	F	1780	1784	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	1739	1740	first strand
Strand 2	F	1751	1757	anti-parallel
Strand 3	F	1744	1746	anti-parallel
Strand 4	F	1810	1813	anti-parallel
Strand 5	F	1798	1803	anti-parallel
Strand 6	F	1788	1792	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	1770	1772	first strand
Strand 2	F	1775	1777	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	1593	1598	first strand
Strand 2	N	1604	1609	anti-parallel
Strand 3	N	1639	1644	parallel
Strand 4	N	1674	1680	parallel
Strand 5	N	1706	1708	parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	1739	1740	first strand
Strand 2	N	1751	1757	anti-parallel
Strand 3	N	1761	1766	anti-parallel
Strand 4	N	1780	1784	anti-parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	1739	1740	first strand
Strand 2	N	1751	1757	anti-parallel
Strand 3	N	1744	1746	anti-parallel
Strand 4	N	1810	1813	anti-parallel
Strand 5	N	1798	1803	anti-parallel
Strand 6	N	1788	1792	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	1770	1772	first strand
Strand 2	N	1775	1777	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7PGU

Analysis of interatomic Contacts of Structural Units in PDB entry:
7PGU