Analysis of interatomic Contacts of Structural Units in PDB entry:
7PH7

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7PH7 entry

There are 4 chains in PDB entry 7PH7 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 12	PHE 580
B	THR 12	PHE 580
C	GLN 1	THR 111
D	GLN 1	SER 113

There are 41 helices in PDB entry 7PH7. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	16	22	Right-handed 310
Helix 2	AA2	A	23	57	Right-handed alpha
Helix 3	AA3	A	66	109	Right-handed alpha
Helix 4	AA4	A	112	117	Right-handed alpha
Helix 5	AA5	A	123	147	Right-handed alpha
Helix 6	AA6	A	147	164	Right-handed alpha
Helix 7	AA7	A	166	213	Right-handed alpha
Helix 8	AA8	A	213	220	Right-handed alpha
Helix 9	AA9	A	222	269	Right-handed alpha
Helix 10	AB1	A	280	294	Right-handed alpha
Helix 11	AB2	A	294	302	Right-handed alpha
Helix 12	AB3	A	304	323	Right-handed alpha
Helix 13	AB4	A	411	418	Right-handed alpha
Helix 14	AB5	A	432	438	Right-handed alpha
Helix 15	AB6	A	446	457	Right-handed alpha
Helix 16	AB7	A	459	463	Right-handed 310
Helix 17	AB8	A	485	498	Right-handed alpha
Helix 18	AB9	A	515	527	Right-handed alpha
Helix 19	AC1	A	569	578	Right-handed alpha
Helix 20	AC2	B	16	21	Right-handed alpha
Helix 21	AC3	B	23	57	Right-handed alpha
Helix 22	AC4	B	62	88	Right-handed alpha
Helix 23	AC5	B	91	109	Right-handed alpha
Helix 24	AC6	B	112	119	Right-handed alpha
Helix 25	AC7	B	123	164	Right-handed alpha
Helix 26	AC8	B	166	209	Right-handed alpha
Helix 27	AC9	B	210	212	Right-handed 310
Helix 28	AD1	B	213	220	Right-handed alpha
Helix 29	AD2	B	223	272	Right-handed alpha
Helix 30	AD3	B	280	323	Right-handed alpha
Helix 31	AD4	B	411	416	Right-handed alpha
Helix 32	AD5	B	432	437	Right-handed alpha
Helix 33	AD6	B	446	457	Right-handed alpha
Helix 34	AD7	B	459	463	Right-handed 310
Helix 35	AD8	B	482	498	Right-handed alpha
Helix 36	AD9	B	514	527	Right-handed alpha
Helix 37	AE1	B	538	544	Right-handed alpha
Helix 38	AE2	B	561	565	Right-handed 310
Helix 39	AE3	B	571	579	Right-handed alpha
Helix 40	AE4	C	86	90	Right-handed 310
Helix 41	AE5	D	86	90	Right-handed 310

There are 11 sheets in PDB entry 7PH7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	359	362	first strand
Strand 2	A	342	349	anti-parallel
Strand 3	A	397	402	anti-parallel
Strand 4	A	405	406	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	532	534	first strand
Strand 2	A	371	376	parallel
Strand 3	A	547	551	parallel
Strand 4	A	556	560	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	419	420	first strand
Strand 2	A	501	502	parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	357	362	first strand
Strand 2	B	343	350	anti-parallel
Strand 3	B	397	402	anti-parallel
Strand 4	B	405	406	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	419	420	first strand
Strand 2	B	501	504	parallel
Strand 3	B	532	535	parallel
Strand 4	B	371	374	parallel
Strand 5	B	547	551	parallel
Strand 6	B	556	560	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	3	7	first strand
Strand 2	C	17	25	anti-parallel
Strand 3	C	77	83	anti-parallel
Strand 4	C	68	72	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	58	59	first strand
Strand 2	C	45	51	anti-parallel
Strand 3	C	34	39	anti-parallel
Strand 4	C	91	97	anti-parallel
Strand 5	C	103	104	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	58	59	first strand
Strand 2	C	45	51	anti-parallel
Strand 3	C	34	39	anti-parallel
Strand 4	C	91	97	anti-parallel
Strand 5	C	108	110	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	3	7	first strand
Strand 2	D	17	25	anti-parallel
Strand 3	D	77	83	anti-parallel
Strand 4	D	67	72	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	57	59	first strand
Strand 2	D	45	51	anti-parallel
Strand 3	D	34	39	anti-parallel
Strand 4	D	91	97	anti-parallel
Strand 5	D	103	104	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	57	59	first strand
Strand 2	D	45	51	anti-parallel
Strand 3	D	34	39	anti-parallel
Strand 4	D	91	97	anti-parallel
Strand 5	D	108	110	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7PH7

Analysis of interatomic Contacts of Structural Units in PDB entry:
7PH7