Analysis of interatomic Contacts of Structural Units in PDB entry:
7PHG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7PHG entry

There are 3 chains in PDB entry 7PHG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 332PRO 527
H
 GLN 1SER 113
L
 GLU 1LYS 107
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 7PHG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
337 342Right-handed alpha
Helix 2
AA2
A
365 370Right-handed alpha
Helix 3
AA3
A
386 390Right-handed 310
Helix 4
AA4
A
404 410Right-handed 310
Helix 5
AA5
H
60 64Right-handed 310
Helix 6
AA6
H
83 87Right-handed 310
Helix 7
AA7
L
29 31Right-handed 310
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There are 7 sheets in PDB entry 7PHG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
356 358first strand
Strand 2
A
395 397anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
377 380first strand
Strand 2
A
431 437anti-parallel
Strand 3
A
508 514anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
4 6first strand
Strand 2
H
20 24anti-parallel
Strand 3
H
77 82anti-parallel
Strand 4
H
67 72anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
10 11first strand
Strand 2
H
108 110parallel
Strand 3
H
88 90anti-parallel
Strand 4
H
33 39anti-parallel
Strand 5
H
46 52anti-parallel
Strand 6
H
56 58anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
93 94first strand
Strand 2
H
102 103anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
11 13first strand
Strand 2
L
102 106parallel
Strand 3
L
84 90anti-parallel
Strand 4
L
33 38anti-parallel
Strand 5
L
45 46anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
19 23first strand
Strand 2
L
70 75anti-parallel
Strand 3
L
62 67anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il