Analysis of interatomic Contacts of Structural Units in PDB entry:
7PI6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7PI6 entry

There are 4 chains in PDB entry 7PI6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 27GLY 316
B
 ASP 996ASP 1285
C
 GLY 38GLY 316
D
 ALA 997ASP 1285
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 52 helices in PDB entry 7PI6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
35 55Right-handed alpha
Helix 2
AA2
A
55 84Right-handed alpha
Helix 3
AA3
A
85 86Right-handed 310
Helix 4
AA4
A
94 98Right-handed 310
Helix 5
AA5
A
99 119Right-handed alpha
Helix 6
AA6
A
120 154Right-handed alpha
Helix 7
AA7
A
201 206Right-handed alpha
Helix 8
AA8
A
212 227Right-handed alpha
Helix 9
AA9
A
256 301Right-handed alpha
Helix 10
AB1
A
304 315Right-handed alpha
Helix 11
AB2
B
1000 1004Right-handed 310
Helix 12
AB3
B
1012 1032Right-handed alpha
Helix 13
AB4
B
1033 1038Right-handed alpha
Helix 14
AB5
B
1040 1057Right-handed alpha
Helix 15
AB6
B
1058 1060Right-handed 310
Helix 16
AB7
B
1075 1089Right-handed alpha
Helix 17
AB8
B
1096 1111Right-handed alpha
Helix 18
AB9
B
1126 1134Right-handed 310
Helix 19
AC1
B
1138 1159Right-handed alpha
Helix 20
AC2
B
1164 1179Right-handed alpha
Helix 21
AC3
B
1185 1198Right-handed alpha
Helix 22
AC4
B
1204 1213Right-handed alpha
Helix 23
AC5
B
1214 1218Right-handed 310
Helix 24
AC6
B
1225 1243Right-handed alpha
Helix 25
AC7
B
1248 1259Right-handed alpha
Helix 26
AC8
B
1268 1285Right-handed alpha
Helix 27
AC9
C
39 55Right-handed alpha
Helix 28
AD1
C
55 84Right-handed alpha
Helix 29
AD2
C
85 85Right-handed 310
Helix 30
AD3
C
93 98Right-handed 310
Helix 31
AD4
C
99 119Right-handed alpha
Helix 32
AD5
C
120 151Right-handed alpha
Helix 33
AD6
C
152 154Right-handed 310
Helix 34
AD7
C
201 206Right-handed alpha
Helix 35
AD8
C
212 226Right-handed alpha
Helix 36
AD9
C
259 301Right-handed alpha
Helix 37
AE1
C
304 315Right-handed alpha
Helix 38
AE2
D
1000 1004Right-handed 310
Helix 39
AE3
D
1010 1032Right-handed alpha
Helix 40
AE4
D
1040 1057Right-handed alpha
Helix 41
AE5
D
1058 1060Right-handed 310
Helix 42
AE6
D
1075 1089Right-handed alpha
Helix 43
AE7
D
1096 1111Right-handed alpha
Helix 44
AE8
D
1126 1134Right-handed 310
Helix 45
AE9
D
1138 1159Right-handed alpha
Helix 46
AF1
D
1164 1179Right-handed alpha
Helix 47
AF2
D
1185 1198Right-handed alpha
Helix 48
AF3
D
1204 1213Right-handed alpha
Helix 49
AF4
D
1214 1218Right-handed 310
Helix 50
AF5
D
1225 1243Right-handed alpha
Helix 51
AF6
D
1248 1259Right-handed alpha
Helix 52
AF7
D
1268 1285Right-handed alpha
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There are no sheets in PDB entry 7PI6
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il