Analysis of interatomic Contacts of Structural Units in PDB entry:
7PJH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7PJH entry

There are 2 chains in PDB entry 7PJH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 10PRO 378
B
 PRO 1758MET 2014
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 7PJH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 12Right-handed 310
Helix 2
AA2
A
13 18Right-handed alpha
Helix 3
AA3
A
104 119Right-handed alpha
Helix 4
AA4
A
120 122Right-handed 310
Helix 5
AA5
A
126 128Right-handed 310
Helix 6
AA6
A
129 138Right-handed alpha
Helix 7
AA7
A
141 149Right-handed alpha
Helix 8
AA8
A
221 231Right-handed alpha
Helix 9
AA9
A
232 244Right-handed alpha
Helix 10
AB1
A
249 264Right-handed alpha
Helix 11
AB2
A
267 283Right-handed alpha
Helix 12
AB3
A
284 291Right-handed alpha
Helix 13
AB4
A
291 307Right-handed alpha
Helix 14
AB5
A
323 336Right-handed alpha
Helix 15
AB6
A
341 360Right-handed alpha
Helix 16
AB7
A
367 371Right-handed 310
Helix 17
AB8
B
1767 1773Right-handed 310
Helix 18
AB9
B
1823 1828Right-handed 310
Helix 19
AC1
B
1832 1852Right-handed alpha
Helix 20
AC2
B
1853 1857Right-handed 310
Helix 21
AC3
B
1865 1867Right-handed 310
Helix 22
AC4
B
1868 1876Right-handed alpha
Helix 23
AC5
B
1892 1898Right-handed 310
Helix 24
AC6
B
1899 1909Right-handed alpha
Helix 25
AC7
B
1922 1926Right-handed 310
Helix 26
AC8
B
1928 1946Right-handed alpha
Helix 27
AC9
B
1946 1954Right-handed alpha
Helix 28
AD1
B
1972 1996Right-handed alpha
Helix 29
AD2
B
2005 2013Right-handed alpha
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There are 4 sheets in PDB entry 7PJH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
97 99first strand
Strand 2
A
86 92anti-parallel
Strand 3
A
19 24parallel
Strand 4
A
47 51anti-parallel
Strand 5
A
123 124parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
37 40first strand
Strand 2
A
31 34anti-parallel
Strand 3
A
54 61anti-parallel
Strand 4
A
75 81anti-parallel
Strand 5
A
155 156anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
373 374first strand
Strand 2
B
1787 1792parallel
Strand 3
B
1798 1803anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1762 1763first strand
Strand 2
B
1883 1887parallel
Strand 3
B
1860 1863parallel
Strand 4
B
1777 1781parallel
Strand 5
B
1805 1810anti-parallel
Strand 6
B
1816 1822anti-parallel
Strand 7
B
1913 1918anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il