Analysis of interatomic Contacts of Structural Units in PDB entry:
7PJJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7PJJ entry

There is 1 chain in PDB entry 7PJJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 10LYS 822
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 7PJJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 27Right-handed alpha
Helix 2
AA2
A
28 36Right-handed alpha
Helix 3
AA3
A
47 51Right-handed 310
Helix 4
AA4
A
80 87Right-handed alpha
Helix 5
AA5
A
89 107Right-handed alpha
Helix 6
AA6
A
125 131Right-handed 310
Helix 7
AA7
A
135 152Right-handed alpha
Helix 8
AA8
A
179 186Right-handed alpha
Helix 9
AA9
A
188 199Right-handed alpha
Helix 10
AB1
A
218 223Right-handed alpha
Helix 11
AB2
A
245 252Right-handed alpha
Helix 12
AB3
A
266 276Right-handed alpha
Helix 13
AB4
A
279 298Right-handed alpha
Helix 14
AB5
A
315 328Right-handed alpha
Helix 15
AB6
A
355 358Right-handed 310
Helix 16
AB7
A
377 386Right-handed alpha
Helix 17
AB8
A
497 503Right-handed alpha
Helix 18
AB9
A
551 565Right-handed alpha
Helix 19
AC1
A
594 606Right-handed alpha
Helix 20
AC2
A
639 650Right-handed alpha
Helix 21
AC3
A
675 677Right-handed 310
Helix 22
AC4
A
689 696Right-handed alpha
Helix 23
AC5
A
780 783Right-handed 310
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There are 10 sheets in PDB entry 7PJJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 58first strand
Strand 2
A
111 112parallel
Strand 3
A
156 162parallel
Strand 4
A
202 205parallel
Strand 5
A
235 238parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
213 214first strand
Strand 2
A
209 210anti-parallel
Strand 3
A
175 177parallel
Strand 4
A
679 681parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
329 333first strand
Strand 2
A
629 632anti-parallel
Strand 3
A
609 614parallel
Strand 4
A
568 574parallel
Strand 5
A
350 353parallel
Strand 6
A
392 394parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
423 428first strand
Strand 2
A
410 417anti-parallel
Strand 3
A
452 453anti-parallel
Strand 4
A
524 527anti-parallel
Strand 5
A
476 480anti-parallel
Strand 6
A
485 489anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
423 428first strand
Strand 2
A
410 417anti-parallel
Strand 3
A
457 459anti-parallel
Strand 4
A
520 522anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
433 434first strand
Strand 2
A
541 546anti-parallel
Strand 3
A
465 472anti-parallel
Strand 4
A
507 514anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
713 721first strand
Strand 2
A
724 731anti-parallel
Strand 3
A
772 773anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
713 721first strand
Strand 2
A
724 731anti-parallel
Strand 3
A
776 778anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
758 767first strand
Strand 2
A
737 745anti-parallel
Strand 3
A
800 806anti-parallel
Strand 4
A
812 819anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
785 788first strand
Strand 2
A
793 796anti-parallel
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