Analysis of interatomic Contacts of Structural Units in PDB entry:
7PL9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7PL9 entry

There are 5 chains in PDB entry 7PL9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 62GLN 1187
B
 SER 62GLN 1187
C
 SER 62GLN 1187
D
 SER 62GLN 1187
E
 SER 62GLN 1187
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are180 helices in PDB entry 7PL9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
66 98Right-handed alpha
Helix 2
AA2
A
112 141Right-handed alpha
Helix 3
AA3
A
144 155Right-handed alpha
Helix 4
AA4
A
157 179Right-handed alpha
Helix 5
AA5
A
195 217Right-handed alpha
Helix 6
AA6
A
222 244Right-handed alpha
Helix 7
AA7
A
245 275Right-handed alpha
Helix 8
AA8
A
289 312Right-handed alpha
Helix 9
AA9
A
319 346Right-handed alpha
Helix 10
AB1
A
348 384Right-handed alpha
Helix 11
AB2
A
464 491Right-handed alpha
Helix 12
AB3
A
492 495Right-handed 310
Helix 13
AB4
A
511 517Right-handed alpha
Helix 14
AB5
A
518 541Right-handed alpha
Helix 15
AB6
A
544 555Right-handed alpha
Helix 16
AB7
A
558 578Right-handed alpha
Helix 17
AB8
A
598 616Right-handed alpha
Helix 18
AB9
A
627 647Right-handed alpha
Helix 19
AC1
A
652 677Right-handed alpha
Helix 20
AC2
A
689 715Right-handed alpha
Helix 21
AC3
A
722 748Right-handed alpha
Helix 22
AC4
A
829 840Right-handed alpha
Helix 23
AC5
A
846 853Right-handed alpha
Helix 24
AC6
A
855 866Right-handed alpha
Helix 25
AC7
A
879 893Right-handed alpha
Helix 26
AC8
A
903 908Right-handed alpha
Helix 27
AC9
A
918 937Right-handed alpha
Helix 28
AD1
A
946 997Right-handed alpha
Helix 29
AD2
A
1000 1018Right-handed alpha
Helix 30
AD3
A
1027 1032Right-handed 310
Helix 31
AD4
A
1036 1044Right-handed alpha
Helix 32
AD5
A
1048 1067Right-handed alpha
Helix 33
AD6
A
1073 1094Right-handed alpha
Helix 34
AD7
A
1099 1122Right-handed alpha
Helix 35
AD8
A
1126 1152Right-handed alpha
Helix 36
AD9
A
1162 1186Right-handed alpha
Helix 37
AE1
B
66 98Right-handed alpha
Helix 38
AE2
B
112 141Right-handed alpha
Helix 39
AE3
B
144 155Right-handed alpha
Helix 40
AE4
B
157 179Right-handed alpha
Helix 41
AE5
B
195 217Right-handed alpha
Helix 42
AE6
B
222 244Right-handed alpha
Helix 43
AE7
B
245 275Right-handed alpha
Helix 44
AE8
B
289 312Right-handed alpha
Helix 45
AE9
B
319 346Right-handed alpha
Helix 46
AF1
B
348 384Right-handed alpha
Helix 47
AF2
B
464 491Right-handed alpha
Helix 48
AF3
B
492 495Right-handed 310
Helix 49
AF4
B
511 517Right-handed alpha
Helix 50
AF5
B
518 541Right-handed alpha
Helix 51
AF6
B
544 555Right-handed alpha
Helix 52
AF7
B
558 578Right-handed alpha
Helix 53
AF8
B
598 616Right-handed alpha
Helix 54
AF9
B
627 647Right-handed alpha
Helix 55
AG1
B
652 677Right-handed alpha
Helix 56
AG2
B
689 715Right-handed alpha
Helix 57
AG3
B
722 748Right-handed alpha
Helix 58
AG4
B
829 840Right-handed alpha
Helix 59
AG5
B
846 853Right-handed alpha
Helix 60
AG6
B
855 866Right-handed alpha
Helix 61
AG7
B
879 893Right-handed alpha
Helix 62
AG8
B
903 908Right-handed alpha
Helix 63
AG9
B
918 937Right-handed alpha
Helix 64
AH1
B
946 997Right-handed alpha
Helix 65
AH2
B
1000 1018Right-handed alpha
Helix 66
AH3
B
1027 1032Right-handed 310
Helix 67
AH4
B
1036 1044Right-handed alpha
Helix 68
AH5
B
1048 1067Right-handed alpha
Helix 69
AH6
B
1073 1094Right-handed alpha
Helix 70
AH7
B
1099 1122Right-handed alpha
Helix 71
AH8
B
1126 1152Right-handed alpha
Helix 72
AH9
B
1162 1186Right-handed alpha
Helix 73
AI1
C
66 98Right-handed alpha
Helix 74
AI2
C
112 141Right-handed alpha
Helix 75
AI3
C
144 155Right-handed alpha
Helix 76
AI4
C
157 179Right-handed alpha
Helix 77
AI5
C
195 217Right-handed alpha
Helix 78
AI6
C
222 244Right-handed alpha
Helix 79
AI7
C
245 275Right-handed alpha
Helix 80
AI8
C
289 312Right-handed alpha
Helix 81
AI9
C
319 346Right-handed alpha
Helix 82
AJ1
C
348 384Right-handed alpha
Helix 83
AJ2
C
464 491Right-handed alpha
Helix 84
AJ3
C
492 495Right-handed 310
Helix 85
AJ4
C
511 517Right-handed alpha
Helix 86
AJ5
C
518 541Right-handed alpha
Helix 87
AJ6
C
544 555Right-handed alpha
Helix 88
AJ7
C
558 578Right-handed alpha
Helix 89
AJ8
C
598 616Right-handed alpha
Helix 90
AJ9
C
627 647Right-handed alpha
Helix 91
AK1
C
652 677Right-handed alpha
Helix 92
AK2
C
689 715Right-handed alpha
Helix 93
AK3
C
722 748Right-handed alpha
Helix 94
AK4
C
829 840Right-handed alpha
Helix 95
AK5
C
846 853Right-handed alpha
Helix 96
AK6
C
855 866Right-handed alpha
Helix 97
AK7
C
879 893Right-handed alpha
Helix 98
AK8
C
903 908Right-handed alpha
Helix 99
AK9
C
918 937Right-handed alpha
Helix 100
AL1
C
946 997Right-handed alpha
Helix 101
AL2
C
1000 1018Right-handed alpha
Helix 102
AL3
C
1027 1032Right-handed 310
Helix 103
AL4
C
1036 1044Right-handed alpha
Helix 104
AL5
C
1048 1067Right-handed alpha
Helix 105
AL6
C
1073 1094Right-handed alpha
Helix 106
AL7
C
1099 1122Right-handed alpha
Helix 107
AL8
C
1126 1152Right-handed alpha
Helix 108
AL9
C
1162 1186Right-handed alpha
Helix 109
AM1
D
66 98Right-handed alpha
Helix 110
AM2
D
112 141Right-handed alpha
Helix 111
AM3
D
144 155Right-handed alpha
Helix 112
AM4
D
157 179Right-handed alpha
Helix 113
AM5
D
195 217Right-handed alpha
Helix 114
AM6
D
222 244Right-handed alpha
Helix 115
AM7
D
245 275Right-handed alpha
Helix 116
AM8
D
289 312Right-handed alpha
Helix 117
AM9
D
319 346Right-handed alpha
Helix 118
AN1
D
348 384Right-handed alpha
Helix 119
AN2
D
464 491Right-handed alpha
Helix 120
AN3
D
492 495Right-handed 310
Helix 121
AN4
D
511 517Right-handed alpha
Helix 122
AN5
D
518 541Right-handed alpha
Helix 123
AN6
D
544 555Right-handed alpha
Helix 124
AN7
D
558 578Right-handed alpha
Helix 125
AN8
D
598 616Right-handed alpha
Helix 126
AN9
D
627 647Right-handed alpha
Helix 127
AO1
D
652 677Right-handed alpha
Helix 128
AO2
D
689 715Right-handed alpha
Helix 129
AO3
D
722 748Right-handed alpha
Helix 130
AO4
D
829 840Right-handed alpha
Helix 131
AO5
D
846 853Right-handed alpha
Helix 132
AO6
D
855 866Right-handed alpha
Helix 133
AO7
D
879 893Right-handed alpha
Helix 134
AO8
D
903 908Right-handed alpha
Helix 135
AO9
D
918 937Right-handed alpha
Helix 136
AP1
D
946 997Right-handed alpha
Helix 137
AP2
D
1000 1018Right-handed alpha
Helix 138
AP3
D
1027 1032Right-handed 310
Helix 139
AP4
D
1036 1044Right-handed alpha
Helix 140
AP5
D
1048 1067Right-handed alpha
Helix 141
AP6
D
1073 1094Right-handed alpha
Helix 142
AP7
D
1099 1122Right-handed alpha
Helix 143
AP8
D
1126 1152Right-handed alpha
Helix 144
AP9
D
1162 1186Right-handed alpha
Helix 145
AQ1
E
66 98Right-handed alpha
Helix 146
AQ2
E
112 141Right-handed alpha
Helix 147
AQ3
E
144 155Right-handed alpha
Helix 148
AQ4
E
157 179Right-handed alpha
Helix 149
AQ5
E
195 217Right-handed alpha
Helix 150
AQ6
E
222 244Right-handed alpha
Helix 151
AQ7
E
245 275Right-handed alpha
Helix 152
AQ8
E
289 312Right-handed alpha
Helix 153
AQ9
E
319 346Right-handed alpha
Helix 154
AR1
E
348 384Right-handed alpha
Helix 155
AR2
E
464 491Right-handed alpha
Helix 156
AR3
E
492 495Right-handed 310
Helix 157
AR4
E
511 517Right-handed alpha
Helix 158
AR5
E
518 541Right-handed alpha
Helix 159
AR6
E
544 555Right-handed alpha
Helix 160
AR7
E
558 578Right-handed alpha
Helix 161
AR8
E
598 616Right-handed alpha
Helix 162
AR9
E
627 647Right-handed alpha
Helix 163
AS1
E
652 677Right-handed alpha
Helix 164
AS2
E
689 715Right-handed alpha
Helix 165
AS3
E
722 748Right-handed alpha
Helix 166
AS4
E
829 840Right-handed alpha
Helix 167
AS5
E
846 853Right-handed alpha
Helix 168
AS6
E
855 866Right-handed alpha
Helix 169
AS7
E
879 893Right-handed alpha
Helix 170
AS8
E
903 908Right-handed alpha
Helix 171
AS9
E
918 937Right-handed alpha
Helix 172
AT1
E
946 997Right-handed alpha
Helix 173
AT2
E
1000 1018Right-handed alpha
Helix 174
AT3
E
1027 1032Right-handed 310
Helix 175
AT4
E
1036 1044Right-handed alpha
Helix 176
AT5
E
1048 1067Right-handed alpha
Helix 177
AT6
E
1073 1094Right-handed alpha
Helix 178
AT7
E
1099 1122Right-handed alpha
Helix 179
AT8
E
1126 1152Right-handed alpha
Helix 180
AT9
E
1162 1186Right-handed alpha
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There are 5 sheets in PDB entry 7PL9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
584 585first strand
Strand 2
A
595 596anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
584 585first strand
Strand 2
B
595 596anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
584 585first strand
Strand 2
C
595 596anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
584 585first strand
Strand 2
D
595 596anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
584 585first strand
Strand 2
E
595 596anti-parallel
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