Analysis of interatomic Contacts of Structural Units in PDB entry:
7PLH

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7PLH entry

There are 9 chains in PDB entry 7PLH (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 17	LYS 276
B	ASP 17	LYS 276
C	ASP 17	LYS 276
D	ASP 17	LYS 276
E	ASP 17	LYS 276
F	ASP 17	LYS 276
G	ASP 17	LYS 276
H	A 1	T 22
I	A 1	T 22

There are 84 helices in PDB entry 7PLH. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	17	30	Right-handed alpha
Helix 2	AA2	A	36	52	Right-handed alpha
Helix 3	AA3	A	65	77	Right-handed alpha
Helix 4	AA4	A	101	113	Right-handed alpha
Helix 5	AA5	A	121	136	Right-handed alpha
Helix 6	AA6	A	150	165	Right-handed alpha
Helix 7	AA7	A	174	182	Right-handed alpha
Helix 8	AA8	A	184	190	Right-handed alpha
Helix 9	AA9	A	201	215	Right-handed alpha
Helix 10	AB1	A	226	238	Right-handed alpha
Helix 11	AB2	A	240	258	Right-handed alpha
Helix 12	AB3	A	264	274	Right-handed alpha
Helix 13	AB4	B	18	30	Right-handed alpha
Helix 14	AB5	B	36	52	Right-handed alpha
Helix 15	AB6	B	65	77	Right-handed alpha
Helix 16	AB7	B	101	113	Right-handed alpha
Helix 17	AB8	B	121	136	Right-handed alpha
Helix 18	AB9	B	150	165	Right-handed alpha
Helix 19	AC1	B	174	182	Right-handed alpha
Helix 20	AC2	B	184	190	Right-handed alpha
Helix 21	AC3	B	201	215	Right-handed alpha
Helix 22	AC4	B	226	238	Right-handed alpha
Helix 23	AC5	B	240	258	Right-handed alpha
Helix 24	AC6	B	264	274	Right-handed alpha
Helix 25	AC7	C	18	30	Right-handed alpha
Helix 26	AC8	C	36	52	Right-handed alpha
Helix 27	AC9	C	65	77	Right-handed alpha
Helix 28	AD1	C	101	113	Right-handed alpha
Helix 29	AD2	C	121	136	Right-handed alpha
Helix 30	AD3	C	150	165	Right-handed alpha
Helix 31	AD4	C	174	182	Right-handed alpha
Helix 32	AD5	C	184	190	Right-handed alpha
Helix 33	AD6	C	201	215	Right-handed alpha
Helix 34	AD7	C	226	238	Right-handed alpha
Helix 35	AD8	C	240	258	Right-handed alpha
Helix 36	AD9	C	264	274	Right-handed alpha
Helix 37	AE1	D	18	30	Right-handed alpha
Helix 38	AE2	D	36	52	Right-handed alpha
Helix 39	AE3	D	65	77	Right-handed alpha
Helix 40	AE4	D	101	113	Right-handed alpha
Helix 41	AE5	D	121	136	Right-handed alpha
Helix 42	AE6	D	150	165	Right-handed alpha
Helix 43	AE7	D	174	182	Right-handed alpha
Helix 44	AE8	D	184	190	Right-handed alpha
Helix 45	AE9	D	201	215	Right-handed alpha
Helix 46	AF1	D	226	238	Right-handed alpha
Helix 47	AF2	D	240	258	Right-handed alpha
Helix 48	AF3	D	264	274	Right-handed alpha
Helix 49	AF4	E	18	30	Right-handed alpha
Helix 50	AF5	E	36	52	Right-handed alpha
Helix 51	AF6	E	65	77	Right-handed alpha
Helix 52	AF7	E	101	113	Right-handed alpha
Helix 53	AF8	E	121	136	Right-handed alpha
Helix 54	AF9	E	150	165	Right-handed alpha
Helix 55	AG1	E	174	182	Right-handed alpha
Helix 56	AG2	E	184	190	Right-handed alpha
Helix 57	AG3	E	201	215	Right-handed alpha
Helix 58	AG4	E	226	238	Right-handed alpha
Helix 59	AG5	E	240	258	Right-handed alpha
Helix 60	AG6	E	264	274	Right-handed alpha
Helix 61	AG7	F	18	30	Right-handed alpha
Helix 62	AG8	F	36	52	Right-handed alpha
Helix 63	AG9	F	65	77	Right-handed alpha
Helix 64	AH1	F	101	113	Right-handed alpha
Helix 65	AH2	F	121	136	Right-handed alpha
Helix 66	AH3	F	150	165	Right-handed alpha
Helix 67	AH4	F	174	182	Right-handed alpha
Helix 68	AH5	F	184	190	Right-handed alpha
Helix 69	AH6	F	201	215	Right-handed alpha
Helix 70	AH7	F	226	238	Right-handed alpha
Helix 71	AH8	F	240	258	Right-handed alpha
Helix 72	AH9	F	264	274	Right-handed alpha
Helix 73	AI1	G	18	30	Right-handed alpha
Helix 74	AI2	G	36	52	Right-handed alpha
Helix 75	AI3	G	65	77	Right-handed alpha
Helix 76	AI4	G	101	113	Right-handed alpha
Helix 77	AI5	G	121	136	Right-handed alpha
Helix 78	AI6	G	150	165	Right-handed alpha
Helix 79	AI7	G	174	182	Right-handed alpha
Helix 80	AI8	G	184	190	Right-handed alpha
Helix 81	AI9	G	201	215	Right-handed alpha
Helix 82	AJ1	G	226	238	Right-handed alpha
Helix 83	AJ2	G	240	258	Right-handed alpha
Helix 84	AJ3	G	264	274	Right-handed alpha

There are 7 sheets in PDB entry 7PLH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	91	94	first strand
Strand 2	A	140	143	parallel
Strand 3	A	167	172	parallel
Strand 4	A	56	59	parallel
Strand 5	A	192	193	parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	91	94	first strand
Strand 2	B	140	143	parallel
Strand 3	B	167	172	parallel
Strand 4	B	56	59	parallel
Strand 5	B	192	193	parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	91	94	first strand
Strand 2	C	140	143	parallel
Strand 3	C	167	172	parallel
Strand 4	C	56	59	parallel
Strand 5	C	192	193	parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	91	94	first strand
Strand 2	D	140	143	parallel
Strand 3	D	167	172	parallel
Strand 4	D	56	59	parallel
Strand 5	D	192	193	parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	91	94	first strand
Strand 2	E	140	143	parallel
Strand 3	E	167	172	parallel
Strand 4	E	56	59	parallel
Strand 5	E	192	193	parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	91	94	first strand
Strand 2	F	140	143	parallel
Strand 3	F	167	172	parallel
Strand 4	F	56	59	parallel
Strand 5	F	192	193	parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	91	94	first strand
Strand 2	G	140	143	parallel
Strand 3	G	167	172	parallel
Strand 4	G	56	59	parallel
Strand 5	G	192	193	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7PLH

Analysis of interatomic Contacts of Structural Units in PDB entry:
7PLH