Analysis of interatomic Contacts of Structural Units in PDB entry:
7PM6

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7PM6 entry

There are 22 chains in PDB entry 7PM6 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	PHE 4	SER 150
A	GLU 5	ARG 792
C	GLU 4	GLU 72
C	GLY 74	PHE 375
H	TRP 1	TRP 1
H	ALA 3	ALA 3
H	CYS 5	CYS 5
H	ALA 7	ALA 7
E	PHE 4	SER 150
D	GLU 5	ARG 792
F	GLU 4	GLU 72
F	GLY 74	PHE 375
I	TRP 1	TRP 1
I	ALA 3	ALA 3
I	CYS 5	CYS 5
I	ALA 7	ALA 7
G	GLU 4	GLU 72
G	GLY 74	PHE 375
J	TRP 1	TRP 1
J	ALA 3	ALA 3
J	CYS 5	CYS 5
J	ALA 7	ALA 7

There are151 helices in PDB entry 7PM6. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	5	19	Right-handed alpha
Helix 2	AA2	B	29	39	Right-handed alpha
Helix 3	AA3	B	44	53	Right-handed alpha
Helix 4	AA4	B	56	63	Right-handed alpha
Helix 5	AA5	B	67	79	Right-handed alpha
Helix 6	AA6	B	87	95	Right-handed alpha
Helix 7	AA7	B	106	116	Right-handed alpha
Helix 8	AA8	B	121	130	Right-handed alpha
Helix 9	AA9	B	141	150	Right-handed alpha
Helix 10	AB1	A	73	77	Right-handed 310
Helix 11	AB2	A	81	95	Right-handed alpha
Helix 12	AB3	A	116	119	Right-handed 310
Helix 13	AB4	A	120	128	Right-handed alpha
Helix 14	AB5	A	138	153	Right-handed alpha
Helix 15	AB6	A	168	184	Right-handed alpha
Helix 16	AB7	A	192	207	Right-handed alpha
Helix 17	AB8	A	245	250	Right-handed 310
Helix 18	AB9	A	259	268	Right-handed alpha
Helix 19	AC1	A	271	275	Right-handed 310
Helix 20	AC2	A	285	290	Right-handed alpha
Helix 21	AC3	A	300	315	Right-handed alpha
Helix 22	AC4	A	318	337	Right-handed alpha
Helix 23	AC5	A	354	365	Right-handed alpha
Helix 24	AC6	A	367	376	Right-handed alpha
Helix 25	AC7	A	392	424	Right-handed alpha
Helix 26	AC8	A	448	480	Right-handed alpha
Helix 27	AC9	A	483	487	Right-handed 310
Helix 28	AD1	A	492	501	Right-handed alpha
Helix 29	AD2	A	504	515	Right-handed alpha
Helix 30	AD3	A	519	532	Right-handed alpha
Helix 31	AD4	A	563	569	Right-handed alpha
Helix 32	AD5	A	573	582	Right-handed alpha
Helix 33	AD6	A	587	594	Right-handed alpha
Helix 34	AD7	A	629	633	Right-handed 310
Helix 35	AD8	A	635	653	Right-handed alpha
Helix 36	AD9	A	674	685	Right-handed alpha
Helix 37	AE1	A	686	697	Right-handed alpha
Helix 38	AE2	A	704	712	Right-handed alpha
Helix 39	AE3	A	713	715	Right-handed 310
Helix 40	AE4	A	723	736	Right-handed alpha
Helix 41	AE5	A	738	740	Right-handed 310
Helix 42	AE6	A	754	792	Right-handed alpha
Helix 43	AE7	C	55	61	Right-handed alpha
Helix 44	AE8	C	78	92	Right-handed alpha
Helix 45	AE9	C	97	101	Right-handed 310
Helix 46	AF1	C	112	126	Right-handed alpha
Helix 47	AF2	C	137	145	Right-handed alpha
Helix 48	AF3	C	172	175	Right-handed 310
Helix 49	AF4	C	181	194	Right-handed alpha
Helix 50	AF5	C	195	197	Right-handed 310
Helix 51	AF6	C	202	217	Right-handed alpha
Helix 52	AF7	C	222	233	Right-handed alpha
Helix 53	AF8	C	252	257	Right-handed alpha
Helix 54	AF9	C	258	262	Right-handed 310
Helix 55	AG1	C	263	268	Right-handed 310
Helix 56	AG2	C	273	283	Right-handed alpha
Helix 57	AG3	C	289	295	Right-handed alpha
Helix 58	AG4	C	301	305	Right-handed 310
Helix 59	AG5	C	308	319	Right-handed alpha
Helix 60	AG6	C	337	349	Right-handed alpha
Helix 61	AG7	C	350	355	Right-handed 310
Helix 62	AG8	C	359	366	Right-handed alpha
Helix 63	AG9	C	368	373	Right-handed alpha
Helix 64	AH1	E	5	19	Right-handed alpha
Helix 65	AH2	E	29	39	Right-handed alpha
Helix 66	AH3	E	44	53	Right-handed alpha
Helix 67	AH4	E	56	63	Right-handed alpha
Helix 68	AH5	E	67	79	Right-handed alpha
Helix 69	AH6	E	87	95	Right-handed alpha
Helix 70	AH7	E	105	116	Right-handed alpha
Helix 71	AH8	E	121	130	Right-handed alpha
Helix 72	AH9	E	140	150	Right-handed alpha
Helix 73	AI1	D	73	77	Right-handed 310
Helix 74	AI2	D	81	95	Right-handed alpha
Helix 75	AI3	D	116	119	Right-handed 310
Helix 76	AI4	D	120	128	Right-handed alpha
Helix 77	AI5	D	138	153	Right-handed alpha
Helix 78	AI6	D	168	184	Right-handed alpha
Helix 79	AI7	D	192	207	Right-handed alpha
Helix 80	AI8	D	245	250	Right-handed 310
Helix 81	AI9	D	259	268	Right-handed alpha
Helix 82	AJ1	D	271	275	Right-handed 310
Helix 83	AJ2	D	285	290	Right-handed alpha
Helix 84	AJ3	D	300	315	Right-handed alpha
Helix 85	AJ4	D	318	337	Right-handed alpha
Helix 86	AJ5	D	354	365	Right-handed alpha
Helix 87	AJ6	D	367	376	Right-handed alpha
Helix 88	AJ7	D	392	424	Right-handed alpha
Helix 89	AJ8	D	448	480	Right-handed alpha
Helix 90	AJ9	D	483	487	Right-handed 310
Helix 91	AK1	D	492	501	Right-handed alpha
Helix 92	AK2	D	504	515	Right-handed alpha
Helix 93	AK3	D	519	532	Right-handed alpha
Helix 94	AK4	D	563	569	Right-handed alpha
Helix 95	AK5	D	573	582	Right-handed alpha
Helix 96	AK6	D	587	594	Right-handed alpha
Helix 97	AK7	D	629	633	Right-handed 310
Helix 98	AK8	D	635	653	Right-handed alpha
Helix 99	AK9	D	674	685	Right-handed alpha
Helix 100	AL1	D	686	697	Right-handed alpha
Helix 101	AL2	D	704	712	Right-handed alpha
Helix 102	AL3	D	713	715	Right-handed 310
Helix 103	AL4	D	723	736	Right-handed alpha
Helix 104	AL5	D	738	740	Right-handed 310
Helix 105	AL6	D	754	792	Right-handed alpha
Helix 106	AL7	F	55	62	Right-handed alpha
Helix 107	AL8	F	78	92	Right-handed alpha
Helix 108	AL9	F	97	101	Right-handed 310
Helix 109	AM1	F	112	126	Right-handed alpha
Helix 110	AM2	F	137	145	Right-handed alpha
Helix 111	AM3	F	172	175	Right-handed 310
Helix 112	AM4	F	181	194	Right-handed alpha
Helix 113	AM5	F	195	197	Right-handed 310
Helix 114	AM6	F	202	217	Right-handed alpha
Helix 115	AM7	F	222	233	Right-handed alpha
Helix 116	AM8	F	234	237	Right-handed 310
Helix 117	AM9	F	252	257	Right-handed alpha
Helix 118	AN1	F	258	262	Right-handed 310
Helix 119	AN2	F	263	268	Right-handed 310
Helix 120	AN3	F	273	283	Right-handed alpha
Helix 121	AN4	F	289	295	Right-handed alpha
Helix 122	AN5	F	301	305	Right-handed 310
Helix 123	AN6	F	308	319	Right-handed alpha
Helix 124	AN7	F	337	347	Right-handed alpha
Helix 125	AN8	F	348	349	Right-handed 310
Helix 126	AN9	F	350	355	Right-handed 310
Helix 127	AO1	F	359	366	Right-handed alpha
Helix 128	AO2	F	368	373	Right-handed alpha
Helix 129	AO3	G	55	61	Right-handed alpha
Helix 130	AO4	G	78	92	Right-handed alpha
Helix 131	AO5	G	97	101	Right-handed 310
Helix 132	AO6	G	112	126	Right-handed alpha
Helix 133	AO7	G	137	145	Right-handed alpha
Helix 134	AO8	G	172	175	Right-handed 310
Helix 135	AO9	G	181	194	Right-handed alpha
Helix 136	AP1	G	195	197	Right-handed 310
Helix 137	AP2	G	202	217	Right-handed alpha
Helix 138	AP3	G	222	233	Right-handed alpha
Helix 139	AP4	G	252	257	Right-handed alpha
Helix 140	AP5	G	258	262	Right-handed 310
Helix 141	AP6	G	263	268	Right-handed 310
Helix 142	AP7	G	273	283	Right-handed alpha
Helix 143	AP8	G	284	285	Right-handed 310
Helix 144	AP9	G	286	288	Right-handed 310
Helix 145	AQ1	G	289	295	Right-handed alpha
Helix 146	AQ2	G	301	305	Right-handed 310
Helix 147	AQ3	G	308	319	Right-handed alpha
Helix 148	AQ4	G	337	349	Right-handed alpha
Helix 149	AQ5	G	350	355	Right-handed 310
Helix 150	AQ6	G	359	366	Right-handed alpha
Helix 151	AQ7	G	368	373	Right-handed alpha

There are 35 sheets in PDB entry 7PM6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	26	28	first strand
Strand 2	B	64	66	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	103	105	first strand
Strand 2	B	138	140	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	12	16	first strand
Strand 2	A	22	27	anti-parallel
Strand 3	A	37	41	anti-parallel
Strand 4	A	48	51	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	100	103	first strand
Strand 2	A	106	110	anti-parallel
Strand 3	A	655	662	parallel
Strand 4	A	157	163	parallel
Strand 5	A	431	439	parallel
Strand 6	A	221	228	anti-parallel
Strand 7	A	234	242	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	208	209	first strand
Strand 2	A	217	218	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	341	344	first strand
Strand 2	A	347	349	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	377	381	first strand
Strand 2	A	386	390	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	538	539	first strand
Strand 2	A	547	551	anti-parallel
Strand 3	A	556	560	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	700	703	first strand
Strand 2	A	748	751	anti-parallel
Strand 3	A	742	744	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	29	32	first strand
Strand 2	C	16	21	anti-parallel
Strand 3	C	8	12	anti-parallel
Strand 4	C	103	107	parallel
Strand 5	C	131	136	parallel
Strand 6	C	357	358	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	53	54	first strand
Strand 2	C	35	38	anti-parallel
Strand 3	C	65	68	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	71	72	first strand
Strand 2	C	75	76	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	169	170	first strand
Strand 2	C	160	166	anti-parallel
Strand 3	C	176	178	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	169	170	first strand
Strand 2	C	160	166	anti-parallel
Strand 3	C	150	155	anti-parallel
Strand 4	C	297	300	parallel
Strand 5	C	329	330	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	238	241	first strand
Strand 2	C	247	250	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	26	28	first strand
Strand 2	E	64	66	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	11	16	first strand
Strand 2	D	22	27	anti-parallel
Strand 3	D	37	41	anti-parallel
Strand 4	D	48	51	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	100	103	first strand
Strand 2	D	106	110	anti-parallel
Strand 3	D	655	662	parallel
Strand 4	D	157	163	parallel
Strand 5	D	431	439	parallel
Strand 6	D	221	228	anti-parallel
Strand 7	D	234	242	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	208	209	first strand
Strand 2	D	217	218	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	341	344	first strand
Strand 2	D	347	349	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	377	381	first strand
Strand 2	D	386	390	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	538	539	first strand
Strand 2	D	547	551	anti-parallel
Strand 3	D	556	560	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	700	703	first strand
Strand 2	D	748	751	anti-parallel
Strand 3	D	742	744	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	29	32	first strand
Strand 2	F	16	21	anti-parallel
Strand 3	F	8	12	anti-parallel
Strand 4	F	103	107	parallel
Strand 5	F	131	136	parallel
Strand 6	F	357	358	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	53	54	first strand
Strand 2	F	35	38	anti-parallel
Strand 3	F	65	68	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	71	72	first strand
Strand 2	F	75	76	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	169	170	first strand
Strand 2	F	160	166	anti-parallel
Strand 3	F	176	178	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	169	170	first strand
Strand 2	F	160	166	anti-parallel
Strand 3	F	150	155	anti-parallel
Strand 4	F	297	300	parallel
Strand 5	F	329	330	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	238	241	first strand
Strand 2	F	247	250	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	29	32	first strand
Strand 2	G	16	21	anti-parallel
Strand 3	G	8	12	anti-parallel
Strand 4	G	103	107	parallel
Strand 5	G	131	136	parallel
Strand 6	G	357	358	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	53	54	first strand
Strand 2	G	35	38	anti-parallel
Strand 3	G	65	68	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	71	72	first strand
Strand 2	G	75	76	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	169	170	first strand
Strand 2	G	160	166	anti-parallel
Strand 3	G	176	178	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	169	170	first strand
Strand 2	G	160	166	anti-parallel
Strand 3	G	150	155	anti-parallel
Strand 4	G	297	300	parallel
Strand 5	G	329	330	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	238	241	first strand
Strand 2	G	247	250	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7PM6

Analysis of interatomic Contacts of Structural Units in PDB entry:
7PM6