Analysis of interatomic Contacts of Structural Units in PDB entry:
7PNO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7PNO entry

There are 14 chains in PDB entry 7PNO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 659GLY 707
B
 SER 469ALA 491
C
 SER 659GLY 707
D
 SER 469ALA 492
E
 SER 659GLY 707
F
 GLY 470ALA 492
G
 SER 659GLY 707
H
 GLY 470GLU 490
I
 SER 659GLY 707
J
 THR 473LYS 486
K
 SER 659GLY 707
L
 SER 471ALA 488
M
 SER 659GLY 707
N
 SER 471GLU 490
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 7PNO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
659 672Right-handed alpha
Helix 2
AA2
A
674 688Right-handed alpha
Helix 3
AA3
A
690 706Right-handed alpha
Helix 4
AA4
B
470 491Right-handed alpha
Helix 5
AA5
C
660 672Right-handed alpha
Helix 6
AA6
C
674 688Right-handed alpha
Helix 7
AA7
C
690 706Right-handed alpha
Helix 8
AA8
D
470 492Right-handed alpha
Helix 9
AA9
E
660 672Right-handed alpha
Helix 10
AB1
E
674 688Right-handed alpha
Helix 11
AB2
E
690 706Right-handed alpha
Helix 12
AB3
F
471 492Right-handed alpha
Helix 13
AB4
G
660 672Right-handed alpha
Helix 14
AB5
G
674 688Right-handed alpha
Helix 15
AB6
G
690 707Right-handed alpha
Helix 16
AB7
H
471 490Right-handed alpha
Helix 17
AB8
I
660 672Right-handed alpha
Helix 18
AB9
I
674 688Right-handed alpha
Helix 19
AC1
I
690 706Right-handed alpha
Helix 20
AC2
J
474 486Right-handed alpha
Helix 21
AC3
K
660 672Right-handed alpha
Helix 22
AC4
K
674 688Right-handed alpha
Helix 23
AC5
K
690 707Right-handed alpha
Helix 24
AC6
L
472 488Right-handed alpha
Helix 25
AC7
M
660 672Right-handed alpha
Helix 26
AC8
M
674 688Right-handed alpha
Helix 27
AC9
M
690 706Right-handed alpha
Helix 28
AD1
N
472 490Right-handed alpha
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There are no sheets in PDB entry 7PNO
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il