Analysis of interatomic Contacts of Structural Units in PDB entry:
7POA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7POA entry

There are 2 chains in PDB entry 7POA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY -1ARG 396
B
 SER 3ARG 396
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 7POA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 21Right-handed alpha
Helix 2
AA2
A
58 73Right-handed alpha
Helix 3
AA3
A
86 101Right-handed alpha
Helix 4
AA4
A
110 123Right-handed alpha
Helix 5
AA5
A
136 145Right-handed alpha
Helix 6
AA6
A
157 168Right-handed alpha
Helix 7
AA7
A
190 201Right-handed alpha
Helix 8
AA8
A
217 221Right-handed 310
Helix 9
AA9
A
222 228Right-handed alpha
Helix 10
AB1
A
255 266Right-handed alpha
Helix 11
AB2
A
266 271Right-handed alpha
Helix 12
AB3
A
276 293Right-handed alpha
Helix 13
AB4
A
294 315Right-handed alpha
Helix 14
AB5
A
332 346Right-handed alpha
Helix 15
AB6
A
374 392Right-handed alpha
Helix 16
AB7
B
5 21Right-handed alpha
Helix 17
AB8
B
58 73Right-handed alpha
Helix 18
AB9
B
86 101Right-handed alpha
Helix 19
AC1
B
110 123Right-handed alpha
Helix 20
AC2
B
136 145Right-handed alpha
Helix 21
AC3
B
157 168Right-handed alpha
Helix 22
AC4
B
190 201Right-handed alpha
Helix 23
AC5
B
217 221Right-handed 310
Helix 24
AC6
B
222 228Right-handed alpha
Helix 25
AC7
B
255 266Right-handed alpha
Helix 26
AC8
B
266 272Right-handed alpha
Helix 27
AC9
B
276 293Right-handed alpha
Helix 28
AD1
B
294 315Right-handed alpha
Helix 29
AD2
B
332 346Right-handed alpha
Helix 30
AD3
B
374 392Right-handed alpha
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There are 6 sheets in PDB entry 7POA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
36 39first strand
Strand 2
A
42 46anti-parallel
Strand 3
A
348 349parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
104 108first strand
Strand 2
A
250 254anti-parallel
Strand 3
A
235 240anti-parallel
Strand 4
A
204 208parallel
Strand 5
A
174 179parallel
Strand 6
A
128 132parallel
Strand 7
A
149 153parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
325 331first strand
Strand 2
A
363 368anti-parallel
Strand 3
A
352 353anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
36 39first strand
Strand 2
B
42 46anti-parallel
Strand 3
B
348 349parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
104 108first strand
Strand 2
B
250 254anti-parallel
Strand 3
B
235 240anti-parallel
Strand 4
B
204 208parallel
Strand 5
B
174 179parallel
Strand 6
B
128 132parallel
Strand 7
B
149 153parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
325 331first strand
Strand 2
B
363 368anti-parallel
Strand 3
B
351 353anti-parallel
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