Analysis of interatomic Contacts of Structural Units in PDB entry:
7POE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7POE entry

There are 2 chains in PDB entry 7POE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 11GLY 321
B
 ALA 11GLY 321
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 7POE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
17 28Right-handed alpha
Helix 2
AA2
A
48 59Right-handed alpha
Helix 3
AA3
A
73 84Right-handed alpha
Helix 4
AA4
A
93 97Right-handed alpha
Helix 5
AA5
A
101 113Right-handed alpha
Helix 6
AA6
A
126 137Right-handed alpha
Helix 7
AA7
A
152 159Right-handed alpha
Helix 8
AA8
A
177 190Right-handed alpha
Helix 9
AA9
A
207 209Right-handed 310
Helix 10
AB1
A
214 227Right-handed alpha
Helix 11
AB2
A
237 249Right-handed alpha
Helix 12
AB3
A
251 253Right-handed 310
Helix 13
AB4
A
264 272Right-handed alpha
Helix 14
AB5
A
285 295Right-handed alpha
Helix 15
AB6
A
297 303Right-handed alpha
Helix 16
AB7
A
311 314Right-handed 310
Helix 17
AB8
A
315 321Right-handed alpha
Helix 18
AB9
B
17 28Right-handed alpha
Helix 19
AC1
B
48 59Right-handed alpha
Helix 20
AC2
B
73 84Right-handed alpha
Helix 21
AC3
B
93 97Right-handed alpha
Helix 22
AC4
B
101 113Right-handed alpha
Helix 23
AC5
B
126 137Right-handed alpha
Helix 24
AC6
B
152 159Right-handed alpha
Helix 25
AC7
B
177 189Right-handed alpha
Helix 26
AC8
B
207 209Right-handed 310
Helix 27
AC9
B
214 227Right-handed alpha
Helix 28
AD1
B
237 249Right-handed alpha
Helix 29
AD2
B
251 253Right-handed 310
Helix 30
AD3
B
264 273Right-handed alpha
Helix 31
AD4
B
285 295Right-handed alpha
Helix 32
AD5
B
297 303Right-handed alpha
Helix 33
AD6
B
311 314Right-handed 310
Helix 34
AD7
B
315 320Right-handed alpha
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There are 8 sheets in PDB entry 7POE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
14 15first strand
Strand 2
A
307 309parallel
Strand 3
A
275 279parallel
Strand 4
A
255 259parallel
Strand 5
A
30 33parallel
Strand 6
A
62 67parallel
Strand 7
A
98 100parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
40 41first strand
Strand 2
A
44 45anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
139 141first strand
Strand 2
A
120 124parallel
Strand 3
A
167 170parallel
Strand 4
A
194 197parallel
Strand 5
A
231 232parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
203 205first strand
Strand 2
A
211 213anti-parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
14 15first strand
Strand 2
B
307 309parallel
Strand 3
B
275 279parallel
Strand 4
B
255 259parallel
Strand 5
B
30 33parallel
Strand 6
B
62 67parallel
Strand 7
B
98 100parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
40 41first strand
Strand 2
B
44 45anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
139 141first strand
Strand 2
B
120 124parallel
Strand 3
B
167 170parallel
Strand 4
B
194 197parallel
Strand 5
B
231 232parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
203 205first strand
Strand 2
B
211 213anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il