Analysis of interatomic Contacts of Structural Units in PDB entry:
7POI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7POI entry

There are 4 chains in PDB entry 7POI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 321ARG 424
B
 ASN 321ARG 424
C
 VAL 79GLN 260
D
 PRO 81GLN 260
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 7POI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
336 339Right-handed 310
Helix 2
AA2
A
361 365Right-handed 310
Helix 3
AA3
A
367 380Right-handed alpha
Helix 4
AA4
B
336 339Right-handed 310
Helix 5
AA5
B
361 365Right-handed 310
Helix 6
AA6
B
367 380Right-handed alpha
Helix 7
AA7
C
82 95Right-handed alpha
Helix 8
AA8
C
203 213Right-handed alpha
Helix 9
AA9
D
82 95Right-handed alpha
Helix 10
AB1
D
203 212Right-handed alpha
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There are 8 sheets in PDB entry 7POI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
324 326first strand
Strand 2
A
351 353anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
329 331first strand
Strand 2
A
346 348anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
341 343first strand
Strand 2
A
389 403anti-parallel
Strand 3
A
406 423anti-parallel
Strand 4
C
104 109anti-parallel
Strand 5
C
252 258anti-parallel
Strand 6
C
139 147anti-parallel
Strand 7
C
199 202anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
324 326first strand
Strand 2
B
351 353anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
329 331first strand
Strand 2
B
346 348anti-parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
341 343first strand
Strand 2
B
389 403anti-parallel
Strand 3
B
406 423anti-parallel
Strand 4
D
104 109anti-parallel
Strand 5
D
252 258anti-parallel
Strand 6
D
139 148anti-parallel
Strand 7
D
198 202anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
118 120first strand
Strand 2
C
123 131anti-parallel
Strand 3
C
217 225anti-parallel
Strand 4
C
163 171anti-parallel
Strand 5
C
182 191anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
127 131first strand
Strand 2
D
217 224anti-parallel
Strand 3
D
163 169anti-parallel
Strand 4
D
184 191anti-parallel
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