Analysis of interatomic Contacts of Structural Units in PDB entry:
7PQ5

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7PQ5 entry

There is 1 chain in PDB entry 7PQ5 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
L	GLU 272	PHE 1357

There are 3 helices in PDB entry 7PQ5. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	L	530	532	Right-handed 310
Helix 2	AA2	L	646	648	Right-handed 310
Helix 3	AA3	L	1277	1281	Right-handed 310

There are 8 sheets in PDB entry 7PQ5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	300	306	first strand
Strand 2	L	312	324	anti-parallel
Strand 3	L	327	332	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	354	358	first strand
Strand 2	L	344	348	anti-parallel
Strand 3	L	337	340	anti-parallel
Strand 4	L	410	413	anti-parallel
Strand 5	L	398	399	anti-parallel

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There are 64 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	365	366	first strand
Strand 2	L	374	378	anti-parallel
Strand 3	L	383	387	anti-parallel
Strand 4	L	392	396	anti-parallel
Strand 5	L	416	419	anti-parallel
Strand 6	L	424	429	anti-parallel
Strand 7	L	435	440	anti-parallel
Strand 8	L	445	450	anti-parallel
Strand 9	L	456	461	anti-parallel
Strand 10	L	469	475	anti-parallel
Strand 11	L	481	486	anti-parallel
Strand 12	L	491	496	anti-parallel
Strand 13	L	502	506	anti-parallel
Strand 14	L	512	517	anti-parallel
Strand 15	L	523	528	anti-parallel
Strand 16	L	535	540	anti-parallel
Strand 17	L	543	547	anti-parallel
Strand 18	L	553	558	anti-parallel
Strand 19	L	564	568	anti-parallel
Strand 20	L	574	579	anti-parallel
Strand 21	L	585	589	anti-parallel
Strand 22	L	595	600	anti-parallel
Strand 23	L	607	611	anti-parallel
Strand 24	L	617	622	anti-parallel
Strand 25	L	629	633	anti-parallel
Strand 26	L	639	644	anti-parallel
Strand 27	L	650	654	anti-parallel
Strand 28	L	660	665	anti-parallel
Strand 29	L	671	675	anti-parallel
Strand 30	L	681	686	anti-parallel
Strand 31	L	692	696	anti-parallel
Strand 32	L	702	707	anti-parallel
Strand 33	L	713	717	anti-parallel
Strand 34	L	722	727	anti-parallel
Strand 35	L	733	737	anti-parallel
Strand 36	L	743	748	anti-parallel
Strand 37	L	754	758	anti-parallel
Strand 38	L	764	769	anti-parallel
Strand 39	L	775	779	anti-parallel
Strand 40	L	785	790	anti-parallel
Strand 41	L	797	801	anti-parallel
Strand 42	L	807	812	anti-parallel
Strand 43	L	818	822	anti-parallel
Strand 44	L	828	833	anti-parallel
Strand 45	L	839	843	anti-parallel
Strand 46	L	849	854	anti-parallel
Strand 47	L	860	865	anti-parallel
Strand 48	L	868	874	anti-parallel
Strand 49	L	880	885	anti-parallel
Strand 50	L	888	895	anti-parallel
Strand 51	L	899	905	anti-parallel
Strand 52	L	908	912	anti-parallel
Strand 53	L	919	926	anti-parallel
Strand 54	L	945	953	anti-parallel
Strand 55	L	959	964	anti-parallel
Strand 56	L	970	974	anti-parallel
Strand 57	L	980	984	anti-parallel
Strand 58	L	990	995	anti-parallel
Strand 59	L	1001	1007	anti-parallel
Strand 60	L	1029	1035	anti-parallel
Strand 61	L	1041	1046	anti-parallel
Strand 62	L	1049	1055	anti-parallel
Strand 63	L	1061	1066	anti-parallel
Strand 64	L	1070	1073	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	1086	1087	first strand
Strand 2	L	1091	1092	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	1098	1099	first strand
Strand 2	L	1103	1104	anti-parallel

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There are 14 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	1106	1107	first strand
Strand 2	L	1110	1114	anti-parallel
Strand 3	L	1120	1125	anti-parallel
Strand 4	L	1134	1137	anti-parallel
Strand 5	L	1148	1150	anti-parallel
Strand 6	L	1156	1160	anti-parallel
Strand 7	L	1166	1171	anti-parallel
Strand 8	L	1176	1182	anti-parallel
Strand 9	L	1187	1194	anti-parallel
Strand 10	L	1197	1206	anti-parallel
Strand 11	L	1211	1218	anti-parallel
Strand 12	L	1235	1241	anti-parallel
Strand 13	L	1247	1251	anti-parallel
Strand 14	L	1257	1260	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	1290	1291	first strand
Strand 2	L	1298	1299	anti-parallel
Strand 3	L	1304	1306	anti-parallel
Strand 4	L	1311	1312	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	1336	1337	first strand
Strand 2	L	1345	1346	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7PQ5

Analysis of interatomic Contacts of Structural Units in PDB entry:
7PQ5