Analysis of interatomic Contacts of Structural Units in PDB entry:
7PQI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7PQI entry

There is 1 chain in PDB entry 7PQI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 28GLY 233
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 7PQI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
30 36Right-handed alpha
Helix 2
AA2
A
36 42Right-handed alpha
Helix 3
AA3
A
47 67Right-handed alpha
Helix 4
AA4
A
103 111Right-handed alpha
Helix 5
AA5
A
133 140Right-handed alpha
Helix 6
AA6
A
196 211Right-handed alpha
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There are 2 sheets in PDB entry 7PQI. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
163 164first strand
Strand 2
A
153 160anti-parallel
Strand 3
A
169 173anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
163 164first strand
Strand 2
A
153 160anti-parallel
Strand 3
A
141 150anti-parallel
Strand 4
A
178 185anti-parallel
Strand 5
A
83 87anti-parallel
Strand 6
A
72 77anti-parallel
Strand 7
A
214 220parallel
Strand 8
A
225 231anti-parallel
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